archaeal - Robuta Search

https://www.ncbi.nlm.nih.gov/Structure/pdb/2C39 2C39: RNase PH core of the archaeal exosome in complex with ADP PROBABLE EXOSOME COMPLEX EXONUCLEASE 1PROBABLE EXOSOME COMPLEX EXONUCLEASE 2ADENOSINE-5'-DIPHOSPHATE rnase ph of the https://www.ncbi.nlm.nih.gov/biosample/SAMN37298630 MIGS Cultured Bacterial/Archaeal sample from Therm... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN08093585 MIGS Cultured Bacterial/Archaeal sample from Idiom... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2022.1023625/full Frontiers | The archaeal class Halobacteria and astrobiology: Knowledge gaps and research... Water bodies on Mars and the icy moons of the outer solar system are now recognized as likely being associated with high levels of salt. Therefore, the study... frontiers archaeal class halobacteria astrobiology https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2020.572560/full Frontiers | Bacterial and Archaeal Diversity and Abundance in Shallow Subsurface Clay Sediments at... Clay layers are common in subsurface where microbial activities play an important role in impacting the biogeochemical properties of adjacent aquifers. In th... https://archaealviruses.org/ Archaeal Viruses archaeal viruses https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2017.01516/full Frontiers | Long-term Fertilization Structures Bacterial and Archaeal Communities along Soil Depth... Soil microbes provide important ecosystem services. Though the effects of changes in nutrient availability due to fertilization on the soil microbial communi... long term https://elifesciences.org/reviewed-preprints/88268 A Timeline of Bacterial and Archaeal Diversification in the Ocean a timeline bacterial archaeal diversification ocean https://www.rcsb.org/structure/3NVK RCSB PDB - 3NVK: Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein... Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2017.00384/full Frontiers | Inside Out: Archaeal Ectosymbionts Suggest a Second Model of Reduced-Genome Evolution Reduced genome symbionts and their organelle counterparts, which have even smaller genomes, are essential to the lives of many organisms. But how and why ha... https://www.ncbi.nlm.nih.gov/biosample/SAMN18350244 MIGS Cultured Bacterial/Archaeal sample from Akker... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2020.568588/full Frontiers | Niche Differentiation of Bacterial Versus Archaeal Soil Nitrifiers Induced by Ammonium... Soil nitrification, mediated mainly by ammonia oxidizing archaea (AOA) and bacteria (AOB), converts ammonium (NH4+) to nitrite (NO2-) and thence nitrate (NO3... niche differentiation https://www.ncbi.nlm.nih.gov/biosample/SAMN09716593 MIGS Cultured Bacterial/Archaeal sample from Strep... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN03455930 MIGS Cultured Bacterial/Archaeal sample from Klebs... - BioSample - NCBI migs cultured bacterial archaeal sample https://pmc.ncbi.nlm.nih.gov/articles/PMC2486338/ Structural and functional mapping of the archaeal multi-aminoacyl-tRNA synthetase complex - PMC Methanothermobacter thermautotrophicus contains a multi-aminoacyl-tRNA synthetase complex (MSC) of LysRS, LeuRS and ProRS. Elongation factor (EF) 1A also... https://www.ncbi.nlm.nih.gov/biosample/SAMN22982383 MIGS Cultured Bacterial/Archaeal sample from Yersi... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/Structure/pdb/5N41 5N41: Archaeal DNA polymerase holoenzyme - SSO6202 at 1.35 Ang resolution PolB1 Binding Protein 21,2-ETHANEDIOL dna polymerase at 1 archaeal holoenzyme https://www.ncbi.nlm.nih.gov/biosample/SAMN11253882 MIGS Cultured Bacterial/Archaeal sample from Trepo... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.rcsb.org/structure/1J22 RCSB PDB - 1J22: Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus,... Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, selenomet derivative https://www.ncbi.nlm.nih.gov/biosample/SAMN02463807 MIGS Cultured Bacterial/Archaeal sample from Prevo... - BioSample - NCBI migs cultured bacterial archaeal sample https://elifesciences.org/reviewed-preprints/88268/reviews A Timeline of Bacterial and Archaeal Diversification in the Ocean a timeline bacterial archaeal diversification ocean https://www.ncbi.nlm.nih.gov/biosample/SAMN02866457 MIGS Cultured Bacterial/Archaeal sample from Metha... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN11253845 MIGS Cultured Bacterial/Archaeal sample from Trepo... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN28879009 MIGS Cultured Bacterial/Archaeal sample from Yersi... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN09780815 MIGS Cultured Bacterial/Archaeal sample from Alter... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.rcsb.org/structure/3PEN RCSB PDB - 3PEN: Structure of archaeal initiation factor aIF2gamma subunit delta 37-47 from... Structure of archaeal initiation factor aIF2gamma subunit delta 37-47 from Sulfolobus solfataricus in the GDP-bound form. https://www.ncbi.nlm.nih.gov/biosample/SAMN22138072 MIGS Cultured Bacterial/Archaeal sample from Thala... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN38151460 MIGS Cultured Bacterial/Archaeal sample from Berma... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN31222372 MIGS Cultured Bacterial/Archaeal sample from Caten... - BioSample - NCBI migs cultured bacterial archaeal sample https://pmc.ncbi.nlm.nih.gov/articles/PMC28023/ Temperature, template topology, and factor requirements of archaeal transcription - PMC Although Archaea are prokaryotic and resemble Bacteria morphologically, their transcription apparatus is remarkably similar to those of eukaryotic cell nuclei.... archaeal transcription temperature template topology factor https://www.ncbi.nlm.nih.gov/Structure/pdb/3WZ0 3WZ0: On archaeal homologs of the human RNase P proteins Pop5 and Rpp30 in the hyperthermophilic... Ribonuclease P protein component 2Ribonuclease P protein component 3 https://pmc.ncbi.nlm.nih.gov/articles/PMC15315/ The specificity of interaction of archaeal transducers with their cognate sensory rhodopsins is... Chimeras of the Halobacterium salinarum transducers HtrI and HtrII were constructed to study the structural determinants for their specific interaction with... https://www.ncbi.nlm.nih.gov/biosample/SAMN38892012 MIGS Cultured Bacterial/Archaeal sample from Delft... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.rcsb.org/structure/3AII RCSB PDB - 3AII: Archaeal non-discriminating glutamyl-tRNA synthetase from Methanothermobacter... Archaeal non-discriminating glutamyl-tRNA synthetase from Methanothermobacter thermautotrophicus rcsb pdb non discriminating trna synthetase archaeal https://www.ncbi.nlm.nih.gov/biosample/SAMN05932987 MIGS Cultured Bacterial/Archaeal sample from Bruce... - BioSample - NCBI migs cultured bacterial archaeal sample https://pmc.ncbi.nlm.nih.gov/articles/PMC16234/ An archaeal genomic signature - PMC Comparisons of complete genome sequences allow the most objective and comprehensive descriptions possible of a lineage's evolution. This communication uses the... genomic signature archaeal pmc https://www.ncbi.nlm.nih.gov/biosample/SAMN05870234 MIGS Cultured Bacterial/Archaeal sample from Chlam... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2022.943314/full Frontiers | Dynamic of bacterial and archaeal diversity in a tropical soil over 6 years of repeated... The soil microbial community plays important roles in nutrient cycling, plant pathogen suppression, decomposition of residues and degradation of pollutants; ... https://www.ncbi.nlm.nih.gov/biosample/SAMN03455929 MIGS Cultured Bacterial/Archaeal sample from Citro... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/Structure/pdb/3ODM 3ODM: Archaeal-type phosphoenolpyruvate carboxylase Phosphoenolpyruvate carboxylaseGOLD (I) CYANIDE IONMALONATE ION archaeal type phosphoenolpyruvate carboxylase https://www.ncbi.nlm.nih.gov/biosample/SAMN20691704 MIGS Cultured Bacterial/Archaeal sample from Aliir... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.rcsb.org/structure/3R07 RCSB PDB - 3R07: Structural analysis of an archaeal lipoylation system. A bi-partite lipoate... Structural analysis of an archaeal lipoylation system. A bi-partite lipoate protein ligase and its E2 lipoyl domain from Thermoplasma acidophilum https://www.ncbi.nlm.nih.gov/biosample/SAMN39457126 MIGS Cultured Bacterial/Archaeal sample from Alter... - BioSample - NCBI migs cultured bacterial archaeal sample https://pmc.ncbi.nlm.nih.gov/articles/PMC11409957/ Intein splicing efficiency and RadA levels can control the mode of archaeal DNA replication - PMC Inteins (intervening proteins), mobile genetic elements removed through protein splicing, often interrupt proteins required for DNA replication, recombination,... https://www.ncbi.nlm.nih.gov/Structure/pdb/1M5Q 1M5Q: Crystal structure of a novel Sm-like archaeal protein from Pyrobaculum aerophilum small nuclear ribonucleoprotein homologACETIC ACIDCADMIUM IONGLYCEROLSODIUM ION https://www.ncbi.nlm.nih.gov/biosample/SAMN03074579 MIGS Cultured Bacterial/Archaeal sample from Metha... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN10285378 MIGS Cultured Bacterial/Archaeal sample from Clost... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.rcsb.org/structure/1K8B RCSB PDB - 1K8B: NMR Structure Analysis of the N-terminal Domain of Archaeal Translation Initiation... NMR Structure Analysis of the N-terminal Domain of Archaeal Translation Initiation Factor 2 Subunit beta https://elifesciences.org/articles/67448/peer-reviews Peer review in Agl24 is an ancient archaeal homolog of the eukaryotic N-glycan chitobiose synthesis... The crenarchaeon Sulfolobus synthesizes the N-glycan core in the identical way as all Eukaryotes, which strengthens the hypothesis that the eukaryotic... https://pmc.ncbi.nlm.nih.gov/articles/PMC17729/ A read-ahead function in archaeal DNA polymerases detects promutagenic template-strand uracil - PMC Deamination of cytosine to uracil is the most common promutagenic change in DNA, and it is greatly increased at the elevated growth temperatures of... https://www.ncbi.nlm.nih.gov/biosample/SAMN06286449 MIGS Cultured Bacterial/Archaeal sample from Bacil... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN18350243 MIGS Cultured Bacterial/Archaeal sample from Akker... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/Structure/pdb/2WAQ 2WAQ: The complete structure of the archaeal 13-subunit DNA-directed RNA Polymerase DNA-DIRECTED RNA POLYMERASE RPO10 SUBUNITDNA-DIRECTED RNA POLYMERASE RPO11 SUBUNITDNA-DIRECTED RNA POLYMERASE RPO12 SUBUNITDNA-DIRECTED RNA POLYMERASE RPO13... the complete https://www.frontiersin.org/research-topics/15432/mechanisms-of-preservation-and-change-in-archaeal-genomes/magazine Mechanisms of Preservation and Change in Archaeal Genomes | Frontiers Research Topic Genomes are central to the biology of unicellular organisms, embodying both the history and the functional potential of each microbial lineage. Preserving... mechanisms preservation change https://www.rcsb.org/structure/3WXM RCSB PDB - 3WXM: Crystal structure of archaeal Pelota and GTP-bound EF1 alpha complex Crystal structure of archaeal Pelota and GTP-bound EF1 alpha complex https://www.rcsb.org/structure/1H0X RCSB PDB - 1H0X: Structure of Alba: an archaeal chromatin protein modulated by acetylation Structure of Alba: an archaeal chromatin protein modulated by acetylation https://www.ncbi.nlm.nih.gov/nuccore/6LLB_D Chain D, Crystal structure of mpy-RNase J (mutant S247A), an archaeal - Nucleotide - NCBI https://www.ncbi.nlm.nih.gov/biosample/SAMN03324159 MIGS Cultured Bacterial/Archaeal sample from Therm... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN13190555 MIGS Cultured Bacterial/Archaeal sample from Bacil... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.ncbi.nlm.nih.gov/biosample/SAMN13190559 MIGS Cultured Bacterial/Archaeal sample from Bacil... - BioSample - NCBI migs cultured bacterial archaeal sample https://www.wikidata.org/wiki/Q48048612 Properties of H. volcanii tRNA intron endonuclease reveal a relationship between the archaeal and... scientific article published in June 1997 https://www.ncbi.nlm.nih.gov/biosample/SAMN46817545 MIGS Cultured Bacterial/Archaeal sample from Prist... - BioSample - NCBI migs cultured bacterial archaeal sample https://elifesciences.org/reviewed-preprints/88268/figures A Timeline of Bacterial and Archaeal Diversification in the Ocean a timeline bacterial archaeal diversification ocean