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Jerkmate
https://cran.r-project.org/web/packages/glow/index.html
CRAN: Package glow
Provides a framework for creating plots with glowing points.
cran packageglow
https://cran.r-project.org/web/packages/serocalculator/index.html
CRAN: Package serocalculator
Translates antibody levels measured in cross-sectional population samples into estimates of the frequency with which seroconversions (infections) occur in the...
cran package
https://cran.r-project.org/web/packages/twdtw/index.html
CRAN: Package twdtw
Implements Time-Weighted Dynamic Time Warping (TWDTW), a measure for quantifying time series similarity. The TWDTW algorithm, described in Maus et al. (2016)...
cran packagetwdtw
https://cran.r-project.org/web/packages/ef/index.html
CRAN: Package ef
A set of functions to estimate capture probabilities and densities from multipass pass removal data.
cran packageef
https://cran.r-project.org/web/packages/intervalpsych/index.html
CRAN: Package intervalpsych
Implements the Interval Consensus Model (ICM) for analyzing continuous bounded interval-valued responses in psychometrics using 'Stan' for 'Bayesian'...
cran package
https://cran.r-project.org/web/packages/bnclassify/index.html
CRAN: Package bnclassify
cran package
https://cran.r-project.org/web/packages/ipsecr/index.html
CRAN: Package ipsecr
Estimates the density of a spatially distributed animal population sampled with an array of passive detectors, such as traps. Models incorporating...
cran package
https://cran.r-project.org/web/packages/mctq/index.html
CRAN: Package mctq
A complete toolkit to process the Munich ChronoType Questionnaire (MCTQ) for its three versions (standard, micro, and shift). MCTQ is a quantitative and...
cran package
https://cran.r-project.org/web/packages/brms.mmrm/index.html
CRAN: Package brms.mmrm
The mixed model for repeated measures (MMRM) is a popular model for longitudinal clinical trial data with continuous endpoints, and 'brms' is a powerful and...
cran packagebrms
https://cran.r-project.org/web/packages/gibble/index.html
CRAN: Package gibble
Build a map of path-based geometry, this is a simple description of the number of parts in an object and their basic structure. Translation and restructuring...
cran package
https://cran.r-project.org/web/packages/cppcontainers/index.html
CRAN: Package cppcontainers
Use 'C++' Standard Template Library containers interactively in R. Includes sets, unordered sets, multisets, unordered multisets, maps, unordered maps,...
cran package
https://cran.r-project.org/web/packages/knfi/index.html
CRAN: Package knfi
Understanding the current status of forest resources is essential for monitoring changes in forest ecosystems and generating related statistics. In South...
cran package
https://cran.r-project.org/web/packages/partykit/index.html
CRAN: Package partykit
A toolkit with infrastructure for representing, summarizing, and visualizing tree-structured regression and classification models. This unified infrastructure...
cran packagepartykit
https://cran.r-project.org/web/packages/PracTools/index.html
CRAN: Package PracTools
cran package
https://cran.r-project.org/web/packages/RcppEigen/index.html
CRAN: Package RcppEigen
R and 'Eigen' integration using 'Rcpp'. 'Eigen' is a C++ template library for linear algebra: matrices, vectors, numerical solvers and related algorithms. It...
cran package
https://cran.rstudio.com/web/packages/gMOIP/index.html
CRAN: Package gMOIP
Make 2D and 3D plots of linear programming (LP), integer linear programming (ILP), or mixed integer linear programming (MILP) models with up to three...
cran package
https://cran.r-project.org/web/packages/installr/
CRAN: Package installr
R is great for installing software. Through the 'installr' package you can automate the updating of R (on Windows, using updateR()) and install new software....
cran packageinstallr
https://cran.r-project.org/web/packages/tidyplate/index.html
CRAN: Package tidyplate
The goal of 'tidyplate' is to help researchers convert different types of microplates into tibbles which can be used in data analysis. It accepts xlsx and csv...
cran package
https://cran.r-project.org/web/packages/PHSMM/index.html
CRAN: Package PHSMM
Provides tools for penalised maximum likelihood estimation of hidden semi-Markov models (HSMMs) with flexible state dwell-time distributions. These include...
cran package
https://cran.r-project.org/web/packages/MD2sample/index.html
CRAN: Package MD2sample
The routine twosample_test() in this package runs the two-sample test using various test statistic for multivariate data. The user can also run several tests...
cran package
https://cran.r-project.org/web/packages/fastLink/index.html
CRAN: Package fastLink
Implements a Fellegi-Sunter probabilistic record linkage model that allows for missing data and the inclusion of auxiliary information. This includes...
cran package
https://cran.r-project.org/web/packages/secsse/index.html
CRAN: Package secsse
Simultaneously infers state-dependent diversification across two or more states of a single or multiple traits while accounting for the role of a possible...
cran package
https://cran.r-project.org/web/packages/TruncatedNormal/index.html
CRAN: Package TruncatedNormal
cran package
https://cran.r-project.org/web/packages/discretefit/index.html
CRAN: Package discretefit
Implements fast Monte Carlo simulations for goodness-of-fit (GOF) tests for discrete distributions. This includes tests based on the Chi-squared statistic, the...
cran package
https://cran.r-project.org/web/packages/tipsae/index.html
CRAN: Package tipsae
It allows for mapping proportions and indicators defined on the unit interval. It implements Beta-based small area methods comprising the classical Beta...
cran package
https://cran.r-project.org/web/packages/proxyC/index.html
CRAN: Package proxyC
Computes proximity between rows or columns of large matrices efficiently in C++. Functions are optimised for large sparse matrices using the Armadillo and...
cran package
https://cran.r-project.org/web/packages/betaregscale/index.html
CRAN: Package betaregscale
Maximum-likelihood estimation of beta regression models for responses derived from bounded rating scales. Observations are treated as interval-censored on (0,...
cran package
https://cran.r-project.org/web/packages/graphql/index.html
CRAN: Package graphql
cran packagegraphql
https://cran.r-project.org/web/packages/cvms/index.html
CRAN: Package cvms
Cross-validate one or multiple regression and classification models and get relevant evaluation metrics in a tidy format. Validate the best model on a test set...
cran package
https://cran.r-project.org/web/packages/covr/index.html
CRAN: Package covr
cran packagecovr
https://cran.r-project.org/web/packages/domir/index.html
CRAN: Package domir
Methods to apply decomposition-based relative importance analysis for R functions. This package supports the application of decomposition methods by providing...
cran package
https://cran.r-project.org/web/packages/ssMousetrack/index.html
CRAN: Package ssMousetrack
Estimates previously compiled state-space modeling for mouse-tracking experiments using the 'rstan' package, which provides the R interface to the Stan C++...
cran package
https://cran.r-project.org/web/packages/PopPsiSeqR/index.html
CRAN: Package PopPsiSeqR
Handle data from evolve and resequence experiments. Measured allele frequencies (e.g., from variants called from high-throughput sequencing data) are compared...
cran package
https://cran.r-project.org/web/packages/densityratio/index.html
CRAN: Package densityratio
Fast, flexible and user-friendly tools for distribution comparison through direct density ratio estimation. The estimated density ratio can be used for...
cran package
https://cran.r-project.org/web/packages/ows4R/index.html
CRAN: Package ows4R
Provides an Interface to Web-Services defined as standards by the Open Geospatial Consortium (OGC), including Web Feature Service (WFS) for vector data, Web...
cran package
https://cran.r-project.org/web/packages/snowflakeauth/index.html
CRAN: Package snowflakeauth
cran package
https://cran.r-project.org/web/packages/RcppParallel/index.html
CRAN: Package RcppParallel
High level functions for parallel programming with 'Rcpp'. For example, the 'parallelFor()' function can be used to convert the work of a standard serial
cran package
https://cran.r-project.org/web/packages/ami/index.html
CRAN: Package ami
A collection of lightweight functions that can be used to determine the computing environment in which your code is running. This includes operating systems,...
cran packageami
https://cran.r-project.org/web/packages/tidycensuskr/index.html
CRAN: Package tidycensuskr
Census and administrative data in South Korea are a basic source of quantitative and mixed-methods research for social and urban scientists. This package...
cran package
https://cran.r-project.org/web/packages/hkevp/index.html
CRAN: Package hkevp
cran package
https://cran.r-project.org/web/packages/aprof/index.html
CRAN: Package aprof
Assists the evaluation of whether and where to focus code optimization, using Amdahl's law and visual aids based on line profiling. Amdahl's profiler organizes...
cran package
https://cran.r-project.org/web/packages/fastText/index.html
CRAN: Package fastText
cran packagefasttext
https://cran.r-project.org/web/packages/GNAR/index.html
CRAN: Package GNAR
Simulation of, and fitting models for, Generalised Network Autoregressive (GNAR) time series models which take account of network structure, potentially with...
cran packagegnar
https://cran.r-project.org/web/packages/yamlme/index.html
CRAN: Package yamlme
Setting layout through 'YAML' headers in 'R-Markdown' documents, enabling their automatic generation. Functions and methods may summarize 'R' objects in...
cran package
https://cran.r-project.org/web/packages/RBesT/index.html
CRAN: Package RBesT
Tool-set to support Bayesian evidence synthesis. This includes meta-analysis, (robust) prior derivation from historical data, operating characteristics and...
cran package
https://cran.r-project.org/web/packages/asremlPlus/index.html
CRAN: Package asremlPlus
Assists in automating the selection of terms to include in mixed models when 'asreml' is used to fit the models. Procedures are available for choosing models...
cran package
https://cran.r-project.org/web/packages/vismeteor/index.html
CRAN: Package vismeteor
Provides a suite of analytical functionalities to process and analyze visual meteor observations from the Visual Meteor Database of the International Meteor...
cran package
https://cran.r-project.org/web/packages/fedmatch/index.html
CRAN: Package fedmatch
Provides a flexible set of tools for matching two un-linked data sets. 'fedmatch' allows for three ways to match data: exact matches, fuzzy matches, and...
cran package
https://cran.r-project.org/web/packages/mlr3db/index.html
CRAN: Package mlr3db
Extends the 'mlr3' package with a backend to transparently work with databases such as 'SQLite', 'DuckDB', 'MySQL', 'MariaDB', or 'PostgreSQL'. The package...
cran package
https://cran.r-project.org/web/packages/ribiosUtils/index.html
CRAN: Package ribiosUtils
Provides interface to the 'Bioinfo-C' (internal name: 'BIOS') library and utilities. 'ribiosUtils' is a Swiss-knife for computational biology in drug...
cran package
https://cran.r-project.org/web/packages/volcano3D/index.html
CRAN: Package volcano3D
Generates interactive plots for analysing and visualising three-class high dimensional data. It is particularly suited to visualising differences in continuous...
cran package
https://cran.r-project.org/web/packages/lightparser/index.html
CRAN: Package lightparser
Split your 'rmarkdown' or 'quarto' files by sections into a tibble: titles, text, chunks. Rebuild the file from the tibble.
cran package
https://cran.r-project.org/web/packages/Domean/index.html
CRAN: Package Domean
Distributed Online Mean Tests is a powerful tool designed to efficiently process and analyze distributed datasets. It enables users to perform mean tests in an...
cran package
https://cran.r-project.org/web/packages/shinyloadtest/index.html
CRAN: Package shinyloadtest
Assesses the number of concurrent users 'shiny' applications are capable of supporting, and for directing application changes in order to support a higher...
cran package
https://cran.r-project.org/web/packages/mirt/index.html
CRAN: Package mirt
cran packagemirt
https://cran.r-project.org/web/packages/tailplots/index.html
CRAN: Package tailplots
Estimators for two functionals used to detect Gamma, Pareto or Lognormal distributions, as well as distributions exhibiting similar tail behavior, as...
cran package
https://cran.r-project.org/web/packages/constructive/index.html
CRAN: Package constructive
Prints code that can be used to recreate R objects. In a sense it is similar to 'base::dput()' or 'base::deparse()' but 'constructive' strives to use idiomatic...
cran packageconstructive
https://cran.r-project.org/web/packages/saeczi/index.html
CRAN: Package saeczi
Provides functionality to fit a zero-inflated estimator for small area estimation. This estimator is a combines a linear mixed effects regression model and a...
cran package
https://cran.r-project.org/web/packages/goldilocks/index.html
CRAN: Package goldilocks
Implements the Goldilocks adaptive trial design for a time to event outcome using a piecewise exponential model and conjugate Gamma prior distributions. The...
cran packagegoldilocks
https://cran.r-project.org/web/packages/stm/index.html
CRAN: Package stm
The Structural Topic Model (STM) allows researchers to estimate topic models with document-level covariates. The package also includes tools for model...
cran packagestm
https://cran.r-project.org/web/packages/apollo/index.html
CRAN: Package apollo
Choice models are a widely used technique across numerous scientific disciplines. The Apollo package is a very flexible tool for the estimation and application...
cran packageapollo
https://cran.r-project.org/web/packages/tidyxl/index.html
CRAN: Package tidyxl
Imports non-tabular from Excel files into R. Exposes cell content, position and formatting in a tidy structure for further manipulation. Tokenizes Excel...
cran package
https://cran.r-project.org/web/packages/Keyboard/index.html
CRAN: Package Keyboard
We developed a package 'Keyboard' for designing single-agent, drug-combination, or phase I/II dose-finding clinical trials. The 'Keyboard' designs are novel...
cran packagekeyboard
https://cran.r-project.org/web/packages/PCAPAM50/index.html
CRAN: Package PCAPAM50
Accurate classification of breast cancer tumors based on gene expression data is not a trivial task, and it lacks standard practices.The 'PAM50' classifier,...
cran package
https://cran.r-project.org/web/packages/EpiNow2/index.html
CRAN: Package EpiNow2
Estimates the time-varying reproduction number, rate of spread, and doubling time using a renewal equation approach combined with Bayesian inference via Stan....
cran package
https://cran.r-project.org/web/packages/ChileDataAPI/index.html
CRAN: Package ChileDataAPI
Provides functions to access data from public RESTful APIs including 'FINDIC API', 'REST Countries API', 'World Bank API', and 'Nager.Date', retrieving...
cran package
https://cran.r-project.org/web/packages/hydroloom/index.html
CRAN: Package hydroloom
A collection of utilities that support creation of network attributes for hydrologic networks. Methods and algorithms implemented are documented in Moore et...
cran package
https://cran.r-project.org/web/packages/boinet/index.html
CRAN: Package boinet
Bayesian optimal interval based on both efficacy and toxicity outcomes (BOIN-ET) design is a model-assisted oncology phase I/II trial design, aiming to...
cran package
https://cran.r-project.org/web/packages/smer/index.html
CRAN: Package smer
The Sparse Marginal Epistasis Test is a computationally efficient genetics method which detects statistical epistasis in complex traits; see Stamp et al....
cran packagesmer
https://cran.r-project.org/web/packages/staggered/index.html
CRAN: Package staggered
cran packagestaggered
https://cran.r-project.org/web/packages/monotonicity/index.html
CRAN: Package monotonicity
Test for monotonicity in financial variables sorted by portfolios. It is conventional practice in empirical research to form portfolios of assets ranked by a...
cran packagemonotonicity
https://cran.r-project.org/web/packages/geometa/index.html
CRAN: Package geometa
Provides facilities to read, write and validate geographic metadata defined with ISO TC211 / OGC ISO geographic information metadata standards, and encoded...
cran package
https://cran.r-project.org/web/packages/MATES/index.html
CRAN: Package MATES
Implements the Multi-view Aggregated Two-Sample (MATES) test, a powerful nonparametric method for testing equality of two multivariate distributions. The...
cran packagemates
https://cran.r-project.org/web/packages/iso8601/index.html
CRAN: Package iso8601
Functions to parse strings with ISO8601 dates, times, and date-times into R-objects. Additionally, there are functions to determine the type of ISO8601 string...
cran package
https://cran.r-project.org/web/packages/revdbayes/index.html
CRAN: Package revdbayes
cran package
https://cran.r-project.org/web/packages/coala/index.html
CRAN: Package coala
Coalescent simulators can rapidly simulate biological sequences evolving according to a given model of evolution. You can use this package to specify such...
cran packagecoala
https://cran.r-project.org/web/packages/gridpattern/index.html
CRAN: Package gridpattern
Provides 'grid' grobs that fill in a user-defined area with various patterns. Includes enhanced versions of the geometric and image-based patterns originally...
cran package
https://cran.r-project.org/web/packages/igraph/index.html
CRAN: Package igraph
Routines for simple graphs and network analysis. It can handle large graphs very well and provides functions for generating random and regular graphs, graph...
cran packageigraph
https://cran.r-project.org/web/packages/escalation/index.html
CRAN: Package escalation
Methods for working with dose-finding clinical trials. We provide implementations of many dose-finding clinical trial designs, including the continual...
cran packageescalation
https://cran.r-project.org/web/packages/mcmcsae/index.html
CRAN: Package mcmcsae
Fit multi-level models with possibly correlated random effects using Markov Chain Monte Carlo simulation. Such models allow smoothing over space and time and...
cran package
https://cran.r-project.org/web/packages/OncoBayes2/index.html
CRAN: Package OncoBayes2
Bayesian logistic regression model with optional EXchangeability-NonEXchangeability parameter modelling for flexible borrowing from historical or concurrent...
cran package
https://cran.r-project.org/web/packages/GPvam/index.html
CRAN: Package GPvam
cran package
https://cran.r-project.org/web/packages/lightAUC/index.html
CRAN: Package lightAUC
cran package
https://cran.r-project.org/web/packages/ForeCA/index.html
CRAN: Package ForeCA
Implementation of Forecastable Component Analysis ('ForeCA'), including main algorithms and auxiliary function (summary, plotting, etc.) to apply 'ForeCA' to...
cran packageforeca
https://cran.r-project.org/web/packages/bsynth/index.html
CRAN: Package bsynth
Implements the Bayesian Synthetic Control method for causal inference in comparative case studies. This package provides tools for estimating treatment effects...
cran package
https://cran.r-project.org/web/packages/pema/index.html
CRAN: Package pema
cran packagepema
https://blog.r-project.org/2021/03/12/windows/utf-8-toolchain-and-cran-package-checks/index.html
Windows/UTF-8 Toolchain and CRAN Package Checks - The R Blog
utf 8cran packagewindowstoolchainchecks
https://cran.r-project.org/web/packages/mlrv/index.html
CRAN: Package mlrv
Plug-in and difference-based long-run covariance matrix estimation for time series regression. Two applications of hypothesis testing are also provided. The...
cran package
https://cran.r-project.org/web/packages/transplantr/index.html
CRAN: Package transplantr
A set of vectorised functions to calculate medical equations used in transplantation, focused mainly on transplantation of abdominal organs. These functions...
cran package
https://cran.r-project.org/web/packages/crctStepdown/index.html
CRAN: Package crctStepdown
Frequentist statistical inference for cluster randomised trials with multiple outcomes that controls the family-wise error rate and provides nominal coverage...
cran package
https://cran.r-project.org/web/packages/geojsonio/index.html
CRAN: Package geojsonio
Convert data to 'GeoJSON' or 'TopoJSON' from various R classes, including vectors, lists, data frames, shape files, and spatial classes. 'geojsonio' does not...
cran package
https://cran.r-project.org/web/packages/esemifar/index.html
CRAN: Package esemifar
The nonparametric trend and its derivatives in equidistant time series (TS) with long-memory errors can be estimated. The estimation is conducted via local...
cran package
https://cran.r-project.org/web/packages/JANE/index.html
CRAN: Package JANE
Fit latent space network cluster models using an expectation-maximization algorithm. Enables flexible modeling of unweighted or weighted network data (with or...
cran packagejane
https://cran.r-project.org/web/packages/inlamemi/index.html
CRAN: Package inlamemi
Facilitates fitting measurement error and missing data imputation models using integrated nested Laplace approximations, according to the method described in...
cran package
https://cran.r-project.org/web/packages/bayesQRsurvey/index.html
CRAN: Package bayesQRsurvey
Provides Bayesian quantile regression models for complex survey data under informative sampling using survey-weighted estimators. Both single- and...
cran package
https://cran.r-project.org/web/packages/birdie/index.html
CRAN: Package birdie
Bayesian models for accurately estimating conditional distributions by race, using Bayesian Improved Surname Geocoding (BISG) probability estimates of...
cran packagebirdie
https://cran.r-project.org/web/packages/VennItem/index.html
CRAN: Package VennItem
Generate Venn diagrams from two or three sets, displaying the overlapping items as lists in the appropriate sections. The lists can be split into columns or...
cran package
https://cran.r-project.org/web/packages/mitools/index.html
CRAN: Package mitools
Tools to perform analyses and combine results from multiple-imputation datasets.
cran package
https://cran.r-project.org/web/packages/winputall/index.html
CRAN: Package winputall
cran package
https://cran.r-project.org/web/packages/naijR/index.html
CRAN: Package naijR
A set of convenience functions as well as geographical/political data about Nigeria, aimed at simplifying work with data and information that are specific to...
cran package