https://elifesciences.org/articles/42832
Modularity, criticality, and evolvability of a developmental gene regulatory network | eLife
A new approach focusing on dynamic modularity helps overcome traditional challenges detecting modularity in complex adaptive systems.
gene regulatory networkmodularitycriticalityevolvability
https://elifesciences.org/articles/04664
Early asymmetric cues triggering the dorsal/ventral gene regulatory network of the sea urchin...
During early embryogenesis of the sea urchin, asymmetrical positioning of the dorsal/ventral organizer relies upon the suppression of organizer activities in...
gene regulatory network
https://openreview.net/forum?id=WwErvyP32IZ&referrer=%5Bthe%20profile%20of%20Shiqiang%20Ma%5D(%2Fprofile%3Fid%3D~Shiqiang_Ma1)
Inferring gene regulatory network via fusing gene expression image and RNA-seq data | OpenReview
gene regulatory network
https://elifesciences.org/articles/23250
Gene regulatory network plasticity predates a switch in function of a conserved transcription...
Rapid evolutionary rewiring of the meiosis transcription network facilitated a switch in the function of a master regulator from regulating meiosis to...
gene regulatory network
https://www.frontiersin.org/journals/oncology/articles/10.3389/fonc.2020.00554/full
Frontiers | Unresolved Complexity in the Gene Regulatory Network Underlying EMT
Epithelial to mesenchymal transition (EMT) is the process whereby a polarised epithelial cell ceases to maintain cell-cell contacts, loses expression of char...
gene regulatory networkin thefrontiersunresolvedcomplexity
https://elifesciences.org/articles/65993v1
Local genetic context shapes the function of a gene regulatory network | eLife
gene regulatory network
https://pmc.ncbi.nlm.nih.gov/articles/PMC10951644/
scGREAT: Transformer-based deep-language model for gene regulatory network inference from...
Gene regulatory networks (GRNs) involve complex and multi-layer regulatory interactions between regulators and their target genes. Precise knowledge of GRNs is...
gene regulatory networklanguage model
https://elifesciences.org/articles/88742
A logic-incorporated gene regulatory network deciphers principles in cell fate decisions | eLife
A top-down model-guided framework unveils the role of regulatory logics underlying gene regulatory networks in cell fate decisions.
gene regulatory network
https://elifesciences.org/articles/65993
Local genetic context shapes the function of a gene regulatory network | eLife
The phenotype of a gene regulatory network depends both qualitatively and quantitatively on the local genetic context of its individual components and cannot...
gene regulatory network
https://www.frontiersin.org/journals/genetics/articles/10.3389/fgene.2014.00015/full
Frontiers | The gene regulatory network for breast cancer: integrated regulatory landscape of...
In this study, we infer the breast cancer gene regulatory network from gene expression data. This network is obtained from the application of the BC3Net infe...
gene regulatory networkbreast cancerfrontiers