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https://forum.mothur.org/t/gaps-misplaced-with-align-seqs/22438
Gaps "misplaced" with align seqs - Commands in mothur - mothur
Jul 6, 2026 - Hi all Over the years, I noticed that align.seqs fails to be consistent in treating gaps. In V4, for example, I run align gaps against SILVA (at it some or...
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