protein sequence - Robuta Search

https://www.wikidata.org/wiki/Q37225464 Multiple DNA and protein sequence alignment based on segment-to-segment comparison - Wikidata scientific article published on October 1996 protein sequence alignment https://pmc.ncbi.nlm.nih.gov/articles/PMC7856229/ Inferring protein sequence-function relationships with large-scale positive-unlabeled learning - PMC Machine learning can infer how protein sequence maps to function without requiring a detailed understanding of the underlying physical or biological... protein sequence https://openreview.net/forum?id=FZoZ7a31GCW Ancestral protein sequence reconstruction using a tree-structured Ornstein-Uhlenbeck variational... We introduce a deep generative model for representation learning of biological sequences that, unlike existing models, explicitly represents the evolutionary... protein sequence a tree ornstein uhlenbeck ancestral reconstruction https://www.news-medical.net/whitepaper/20180618/Review-Antibody-Protein-Sequence-Analysis-Using-Mass-Spectrometry.aspx Review: Antibody Protein Sequence Analysis Using Mass Spectrometry Jul 23, 2024 - During the process of research and development of antibody drug molecules, an essential step is determining the sequence of the antibody. Mass spectrometry... protein sequence analysis review antibody using mass https://www.frontiersin.org/journals/plant-science/articles/10.3389/fpls.2015.00776/full Frontiers | Common protein sequence signatures associate with Sclerotinia borealis lifestyle and... Fungal plant pathogens produce secreted proteins adapted to function outside fungal cells to facilitate colonization of their hosts. In many cases such as fo... protein sequence sclerotinia borealis frontiers common signatures https://rcsb.org/docs/sequence-viewers/protein-sequence-alignment-view Protein Sequence Alignment View As a member of the wwPDB, the RCSB PDB curates and annotates PDB data according to agreed upon standards. The RCSB PDB also provides a variety of tools and... protein sequence alignment view https://www.a-star.edu.sg/bii/research/bsfd/psa BII - Protein Sequence Analysis protein sequence bii analysis https://www.ehu.eus/eu/web/numaps/argitalpenak-2012/-/asset_publisher/HJnduTAguVvV/content/identification-of-the-protein-sequence-of-the-type-iii-effector-xopd-from-the-b100-strain-of-xanthomonas-campestris-pv-campestris Identification of the protein sequence of the type III effector XopD from the B100 strain of... type iii effector of the protein sequence https://edubirdie.com/docs/boston-university/cas-bi-108-biology-2/85557-reagents-for-protein-sequence-determination Reagents for Protein Sequence Determination | Boston University - Edubirdie Understanding Reagents for Protein Sequence Determination better is easy with our detailed Lecture Note and helpful study notes. protein sequence boston university reagents determination edubirdie https://www.longdom.org/open-access/comparison-of-protein-sequence-by-use-of-moment-vector-under-binary-representation-94589.html Comparison of Protein Sequence by use of Moment Vector under Bina This paper is elaborating the sequences of whole genomes and proteins as real signals and deals with their spectrums in the frequency domain by applying.. protein sequence by use comparison moment vector https://www.ehu.eus/es/web/numaps/publicaciones-2012/-/asset_publisher/HJnduTAguVvV/content/identification-of-the-protein-sequence-of-the-type-iii-effector-xopd-from-the-b100-strain-of-xanthomonas-campestris-pv-campestris Identification of the protein sequence of the type III effector XopD from the B100 strain of... type iii effector of the protein sequence https://pmc.ncbi.nlm.nih.gov/articles/PMC12488478/ Connecting chemical and protein sequence space to predict biocatalytic reactions - PMC The application of biocatalysis in synthesis has the potential to offer streamlined routes towards target molecules1, tunable catalyst-controlled selectivity2,... protein sequence space connecting chemical https://www.wikidata.org/wiki/Q30655328 Universal trees based on large combined protein sequence data sets. - Wikidata based on protein sequence data sets universal trees https://www.longdom.org/open-access/comparison-of-protein-sequence-by-use-of-moment-vector-under-binary-representation.pdf Comparison of Protein Sequence by use of Moment Vector under Binary Representation protein sequence by use comparison https://www.wikidata.org/wiki/Q54875058 PROSITE and SWISS-PROT: identification of protein function from primary sequence through the... Research project funded by the Swiss National Science Foundation https://www.ncbi.nlm.nih.gov/gene/6144815 EcSMS35_3164 insertion sequence 2 OrfA protein [Escherichia coli SMS-3-5] - Gene - NCBI https://www.wikidata.org/wiki/Q41644025 A cyclin A-protein kinase complex possesses sequence-specific DNA binding activity: p33cdk2 is a... scientific article published on January 1992 https://elifesciences.org/articles/105565 Interpretable protein-DNA interactions captured by structure-sequence optimization | eLife A predictive biophysical model that integrates protein-DNA structures and sequences to accurately determine genomic binding sites and affinities of DNA-binding... by structure sequence optimization protein dna interactions https://pmc.ncbi.nlm.nih.gov/articles/PMC5408826/ Protein multiple sequence alignment benchmarking through secondary structure prediction - PMC Multiple sequence alignment (MSA) is commonly used to analyze sets of homologous protein or DNA sequences. This has lead to the development of many methods and... multiple sequence alignment secondary structure protein benchmarking prediction https://www.mdpi.com/2073-8994/17/3/408 Multiple Alignments of Protein Families with Weak Sequence Similarity Within the Family Statistically significant multiple sequence alignment construction is an important task that has many biological applications. We applied the method for... protein families https://www.wikidata.org/wiki/Q30648351 IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific... https://3dfootprint.eead.csic.es/ 3D-footprint: a database for the analysis of sequence recognition in protein-DNA complexes of known... 3D-footprint is a database of DNA-binding protein structures that is updated weekly with Protein Data Bank complexes, providing: interface graphs and footprint... https://pmc.ncbi.nlm.nih.gov/articles/PMC51396/ The amino acid sequence of a glutamic acid-rich protein from bovine retina as deduced from the cDNA... cDNA clones encoding a glutamic acid-rich protein were isolated from a bovine retina cDNA expression library. The cDNA sequence contained an open reading frame... https://pmc.ncbi.nlm.nih.gov/articles/PMC46096/ cDNA and protein sequence of polymorphic macaque albumins that differ in bilirubin binding - PMC The rhesus monkey, Macaca mulatta, exhibits a geographically restricted polymorphism of serum albumins Mac A and Mac B that is recognized by electrophoresis... https://pmc.ncbi.nlm.nih.gov/articles/PMC12626006/ From sequence to scaffold: Computational design of protein nanoparticle vaccines from... Self-assembling protein nanoparticle vaccines have steadily gained traction in both academic and industry vaccine development over the last decade. Recent work... computational design protein nanoparticle sequence scaffold vaccines https://www.thermofisher.com/antibody/primary/panther/protein-RNA%20sequence-specific%20adaptor%20activity protein-RNA sequence-specific adaptor activity Antibodies | Invitrogen Antibodies for proteins involved in protein-RNA sequence-specific adaptor activity pathways, according to their Panther/Gene Ontology Classification rna sequence protein specific adaptor activity https://pmc.ncbi.nlm.nih.gov/articles/PMC18066/ Detection of human neurotropic JC virus DNA sequence and expression of the viral oncogenic protein... Medulloblastoma represents greater than 25% of childhood intracranial neoplasms and is considered a highly malignant tumor. This tumor, which arises... https://pmc.ncbi.nlm.nih.gov/articles/PMC2430716/ Prediction of enzyme function by combining sequence similarity and protein interactions - PMC A number of studies have used protein interaction data alone for protein function prediction. Here, we introduce a computational approach for annotation of... https://www.ncbi.nlm.nih.gov/protein/82270529?report=GenPept Chromosome undetermined SCAF12065, whole genome shotgun sequence - Protein - NCBI whole genome shotgun chromosome undetermined sequence protein https://www.rcsb.org/structure/5W3N RCSB PDB - 5W3N: Molecular structure of FUS low sequence complexity domain protein fibrils Molecular structure of FUS low sequence complexity domain protein fibrils https://pmc.ncbi.nlm.nih.gov/articles/PMC12121366/ PLM-DBPs: enhancing plant DNA-binding protein prediction by integrating sequence-based and... DNA-binding proteins (DBPs) play a crucial role in gene regulation, development, and environmental responses across plants, animals, and microorganisms.... dna binding protein https://pmc.ncbi.nlm.nih.gov/articles/PMC29838/ The SBASE protein domain library, release 8.0: a collection of annotated protein sequence segments... SBASE 8.0 is the eighth release of the SBASE library of protein domain sequences that contains 294 898 annotated structural, functional, ligand-binding and... https://elifesciences.org/articles/29880 Inferring joint sequence-structural determinants of protein functional specificity | eLife A statistical approach for predicting non-active site residues responsible for allostery, cooperativity, or other subtle but functionally important... inferring joint sequence structural determinants https://pmc.ncbi.nlm.nih.gov/articles/PMC29270/ Predicting the reactivity of proteins from their sequence alone: Kazal family of protein inhibitors... An additivity-based sequence to reactivity algorithm for the interaction of members of the Kazal family of protein inhibitors with six selected serine... https://www.bath.ac.uk/guides/sequence-and-protein-analysis-tools/ Sequence and protein analysis tools A selection of useful tools to aid with sequence and protein analysis. protein analysis sequence tools https://www.ncbi.nlm.nih.gov/protein/AGP18025 Sequence 71 from patent US 8461421 - Protein - NCBI sequence 71 patent us protein https://www.ncbi.nlm.nih.gov/nuccore/LC146649 Bos taurus gene, myostatin protein, partial sequence, note: mongolian - Nucleotide - NCBI bos taurus gene myostatin protein https://www.rcsb.org/structure/1J5N RCSB PDB - 1J5N: Solution Structure of the Non-Sequence-Specific HMGB protein NHP6A in complex with... Solution Structure of the Non-Sequence-Specific HMGB protein NHP6A in complex with SRY DNA https://www.ncbi.nlm.nih.gov/nuccore/LC146650 Ovis aries gene, myostatin protein, partial sequence, note: breed: Uze - Nucleotide - NCBI ovis aries https://www.wikidata.org/wiki/Q106952138 sequence-specific DNA binding protein - Wikidata dna binding protein sequence specific wikidata https://www.wikidata.org/wiki/Q48388712 Nucleotide sequence of the heat shock regulatory gene of E. coli suggests its protein product may... scientific article published in August 1984 https://pmc.ncbi.nlm.nih.gov/articles/PMC20529/ The nude gene encodes a sequence-specific DNA binding protein with homologs in organisms that lack... In the mouse, the product of the nude locus, Whn, is required for the keratinization of the hair shaft and the differentiation of epithelial progenitor cells...