https://courses.iris.nitk.ac.in/course/info.php?id=9163
Summary of CH815 - Molecular Simulations
molecular simulationssummary
https://mural.maynoothuniversity.ie/id/eprint/17902/
Understanding the Structure and Function of Viral Glycosylation by Molecular Simulations:...
structure and functionunderstanding themolecular simulationsviralglycosylation
https://www.cea.fr/drf/Lists/publications20072010/StructuredDisplayForm.aspx?ID=45443
Structural dynamics of protein backbone phi angles: extended molecular dynamics simulations versus...
structural dynamicsmolecular simulationsproteinbackbonephi
https://research.hub.ku.edu.tr/entities/publication/396cfbeb-4d2b-4bb9-96cb-957bec872079
Molecular simulations of porous coordination network-based mixed matrix membranes for CO2/N2...
In this study, the challenge of selecting porous coordination networks (PCNs) as filler particles in mixed matrix membranes (MMMs) was examined using molecular...
molecular simulationsporouscoordinationnetworkbased
https://iris.sissa.it/handle/20.500.11767/148092
Development and application of methods to integrate molecular simulations with experimental...
molecular simulationsdevelopmentapplicationmethodsintegrate
https://scholarshare.temple.edu/items/8506f74e-f29e-420e-bbac-178957d642ec
Using Molecular Simulations and Statistical Models to Understand Biomolecular Conformational...
Conformational dynamics are important to the function of biological molecules. While many experimental techniques (e.g. X-ray crystallography and NMR...
molecular simulationsstatistical modelsusingunderstand
https://www.globethesis.com/?t=2381330620464652
Molecular Simulations Of Methane Adsorption By Inorganic Minerals
Shale gas is a very important unconventional oil and gas resource,in which adsorbed shale gas accounts for 20%~80%.The main component of shale gas is...
molecular simulationsmethaneadsorptioninorganicminerals
https://ora.uniurb.it/handle/11576/2746593
Molecular Simulations Matching Denaturation Experiments for N-6-Methyladenosine
molecular simulationsmatchingdenaturationexperiments
https://researchportalplus.anu.edu.au/en/publications/nonlinear-mechanics-of-triblock-copolymer-elastomers-from-molecul/fingerprints/
Nonlinear mechanics of triblock copolymer elastomers: From molecular simulations to network models...
molecular simulationsnetwork modelsnonlinearmechanicselastomers
https://openreview.net/forum?id=VPHFKbhJIJ
Symmetry-Driven Discovery of Dynamical Variables in Molecular Simulations | OpenReview
We introduce a novel approach for discovering effective degrees of freedom (DOF) in molecular dynamics simulations by mapping the DOF to approximate symmetries...
molecular simulationssymmetrydrivendiscoverydynamical
https://www.osti.gov/pages/biblio/2356827-xe-recovery-from-nuclear-power-plants-off-gas-streams-molecular-simulations-gas-permeation-through-dd3r-zeolite-membrane
Xe Recovery from Nuclear Power Plants Off-Gas Streams: Molecular Simulations of Gas Permeation...
The U.S. Department of Energy's Office of Scientific and Technical Information
nuclear power plantsmolecular simulationsxerecoverygas
https://www.booktopia.com.au/molecular-simulations-and-multiphysics-nanoscale-coupling-james-d-lee/book/9781032556789.html
Molecular Simulations and Multiphysics Nanoscale Coupling by James D. Lee | 9781032556789 |...
Buy Molecular Simulations and Multiphysics Nanoscale Coupling by James D. Lee from Booktopia. Get a discounted Hardcover from Australia's leading online...
molecular simulationsby jamesmultiphysicscouplinglee
https://discourse.threejs.org/t/atomdojo-three-js-powered-interactive-molecular-simulations/91165
AtomDojo - three.js powered interactive molecular simulations - Showcase - three.js forum
Apr 22, 2026 - Hi all, Sharing AtomDojo, a browser project built with three.js for rendering and interaction. It lets users manipulate molecular carbon structures in real...
three jsmolecular simulationspoweredinteractiveshowcase
https://steinmetz.union.edu/abstract/coarse-grained-molecular-simulations-dna-condensation-presence-cobalt-hexamine
Coarse Grained Molecular Simulations of DNA Condensation in the Presence of Cobalt Hexamine |...
molecular simulationscoarsednacondensationpresence
https://par.nsf.gov/biblio/10499573-perspectives-theoretical-models-molecular-simulations-polymer-brushes
Perspectives on Theoretical Models and Molecular Simulations of Polymer Brushes | NSF Public Access...
This page contains metadata information for the record with PAR ID 10499573
molecular simulationspublic accessperspectivestheoreticalmodels
https://meetings-archive.aps.org/mar/2010/a17/1/
Molecular simulations of polymer glasses under active deformation - Possible suggestions for order...
Many of the technologically important mechanical properties of polymers depend crucially on their properties in the glass state. Despite their tremendous import
molecular simulationspolymerglassesactivedeformation
https://chbe.umd.edu/event/15394/chbe-seminar-can-molecular-simulations-provide-insight-to-biomolecule-structure-and-mechanisms
ChBE Seminar: Can Molecular Simulations Provide Insight to Biomolecule Structure and Mechanisms? |...
molecular simulationsseminarprovideinsightbiomolecule
https://cordis.europa.eu/project/id/767912/results/pl
Revolutionary new quantum chemical software for molecular simulations | QCLAB | Projekt | Wyniki |...
Deliverables, publications, datasets, software, exploitable results
chemical softwaremolecular simulationsrevolutionarynewquantum
https://researchportal.port.ac.uk/en/publications/comparison-of-methods-to-reweight-from-classical-molecular-simula/
Comparison of methods to reweight from classical molecular simulations to QM/MM potentials -...
molecular simulationscomparisonmethodsclassicalqm
https://data.mendeley.com/datasets/76233tt7cn/1
NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations -...
Abstract The latest release of NWChem delivers an open-source computational chemistry package with extensive capabilities for large scale simulations of...
open source solutionlarge scalemolecular simulationsnwchemcomprehensive
https://kuscholarworks.ku.edu/entities/publication/b092a501-76ed-451d-8301-a3008e9129b6
Energy-Related Applications of Molecular Simulations
We employ molecular simulations to investigate two key issues pertinent to sustainable energy: reducing emissions of CO2 into the atmosphere and the use of...
related applicationsmolecular simulationsenergy
https://www.materialsdesign.com/contentitemmail/slides-high-throughput-molecular-simulations-for-gas-sorption-in-polymers
Slides-High-Throughput-Molecular-Simulations-for-Gas-Sorption-in-Polymers
high throughputmolecular simulationsgas sorptionslidespolymers
https://ricerca.sns.it/handle/11384/4207
A Mean Field Approach for Molecular Simulations of Liquids and Solutions
molecular simulationsmeanfieldapproachliquids
https://opus4.kobv.de/opus4-zib/frontdoor/index/index/docId/4240
OPUS 4 | Standards-based metadata management for molecular simulations
metadata managementmolecular simulationsopusstandardsbased
https://engineering.wisc.edu/blog/meet-grad-student-carlos-huang-zhu-using-molecular-simulations-to-study-nanoparticles/
Meet grad student Carlos Huang-Zhu: Using molecular simulations to study nanoparticles - College of...
Nov 22, 2024 - Carlos Huang-Zhu is a University of Wisconsin-Madison College of Engineering Graduate Engineering Research Scholar in the Department of Chemical and Biological...
molecular simulationscollege ofmeetgradstudent
https://ucrisportal.univie.ac.at/en/publications/dynamics-of-the-eag1-k-channel-selectivity-filter-assessed-by-mol/
Dynamics of the EAG1 K+ channel selectivity filter assessed by molecular dynamics simulations -...
molecular simulationsdynamicskchannelfilter
https://manual.gromacs.org/documentation/2023.2/reference-manual/special/mimic-qmmm.html
MiMiC Hybrid Quantum Mechanical/Molecular Mechanical simulations - GROMACS 2023.2 documentation
molecular simulationsmimichybridquantummechanical
https://ouci.dntb.gov.ua/works/9JQQeMPw/
Molecular simulations: From fundamental principles to applications in gaseous pollutant control
molecular simulationsfundamental principlesapplicationspollutantcontrol
https://engineerfix.com/what-is-the-buckingham-potential-in-molecular-simulations/
What Is the Buckingham Potential in Molecular Simulations? - Engineer Fix
Oct 25, 2025 - Understand the Buckingham potential, the key mathematical function defining precise atomic interactions for advanced molecular simulations.
what ismolecular simulationsbuckinghampotentialengineer
https://www.morressier.com/o/event/5fc63c8003137aa5256f9993/article/5fc63d629e0a135cbecffadd
Molecular simulations of the reactivity of Hsub2/subO-bearing supercritical COsub2/sub...
molecular simulationsreactivitysubobearingsupercritical
https://refubium.fu-berlin.de/handle/fub188/49146?locale-attribute=en
Refubium - Finite-size effects in molecular simulations: a physico-mathematical view
molecular simulationsfinitesizeeffectsmathematical
https://researchexperts.utmb.edu/en/publications/molecular-simulations-on-the-thermal-stabilization-of-dna-by-hype/
Molecular simulations on the thermal stabilization of DNA by hyperthermophilic chromatin protein...
molecular simulationsthermalstabilizationdnachromatin
https://www.mpi-magdeburg.mpg.de/3568707/Stein
Molecular Simulations and Design | Max Planck Institute for Dynamics of Complex Technical Systems
max planck institutemolecular simulationstechnical systemsdesigndynamics
https://www.frontiersin.org/journals/physics/articles/10.3389/fphy.2025.1614785/full
Frontiers | Molecular simulations of cavitation bubble dynamics
We study the cavitation bubble that forms as a nano-scale spherical surface is detached from a flat surface using molecular dynamics (MD) simulations. This i...
molecular simulationsfrontierscavitationbubbledynamics
https://repository.gatech.edu/entities/publication/3925cbf3-9a14-425d-8791-a24f53509e49
Molecular simulations of the bulk-heterojunction morphology in organic solar cells
In this Thesis, we aim to elucidate clear connections between the chemical functionality and molecular morphologies of a number of high-performing or benchmark...
organic solar cellsmolecular simulationsbulkmorphology
https://khazna.ku.ac.ae/en/publications/molecular-simulations-of-phenol-and-ibuprofen-removal-from-water-/fingerprints/
Molecular simulations of phenol and ibuprofen removal from water using multilayered graphene oxide...
molecular simulationsgraphene oxidephenolibuprofenremoval
https://unifind.uniss.it/resource/item/35657?language=en-US
Dynamics of Water Adsorbed in Zeolites studied by Molecular Dynamics Simulations: Hydrated zeolite...
Unifind is a portal where you can discover the expertise within a university by searching among experts, courses, professions, people, publications, and...
molecular simulationsdynamicswaterstudiedzeolite
https://resources.sw.siemens.com/nl-NL/case-study-argonne-national-laboratory/
Argonne Systems uses HPCWorks to smooth out quantum molecular dynamics simulations | Siemens
Argonne Systems uses HPCWorks to smooth out quantum molecular dynamics simulations
molecular dynamicssystemsusessmoothquantum
https://scholars.cityu.edu.hk/en/activities/nano-engineering-of-construction-materials-using-molecular-dynami/
Nano-engineering of construction materials using molecular dynamics simulations: Prospects and...
construction materialsmolecular dynamicsnanoengineeringusing
https://iris.cnr.it/handle/20.500.14243/371195
Collective Mode Mining from Molecular Dynamics Simulations: A Comparative Approach
molecular dynamicscollectivemodeminingsimulations
https://www.sdsc.edu/news/2018/PR20180305_protein_binding.html
SDSC Simulations Reveal How a Heart Drug Molecular Switch Is Turned On and Off
SDSC Simulations Reveal How a Heart Drug Molecular Switch Is Turned On and Off
turned onsdscsimulationsrevealheart
https://repositori.urv.cat/estatic/TFG0011/en_TFG9034.html
Molecular Dynamics Simulations of Molecular Glue Degraders: targeting the DDB1-CDK12-Cyclin K...
Targeted protein degradation using molecular glue degraders is a novel therapeutic strategy for modulating hard-to-drug proteins like CDK12. This thesis...
molecular dynamicssimulationsgluetargetingcyclin
https://research.chalmers.se/en/publication/541044
Machine Learning in Molecular Dynamics Simulations of Biomolecular Systems
Machine learning (ML) has emerged as a pervasive tool in science, engineering, and beyond. Its success has also led to several synergies with molecular...
machine learningmolecular dynamicssimulationssystems
https://opus.uleth.ca/items/0638f2bb-3a45-47f6-a5d6-0f72bc5060b1/full
Characterization and rational design of biomolecular sensors using molecular dynamics simulations
Biosensors are analytical devices that use biological components to detect and report the presence of a target molecule. Although useful for a broad range of...
design ofmolecular dynamicscharacterizationrationalsensors
https://repository.lib.ncsu.edu/items/3fbc88b5-6767-451d-a67d-16afb30894ce
Modeling of Uranium Mononitride with Molecular Dynamics Simulations
molecular dynamicsmodelinguraniumsimulations
https://medicine.uams.edu/biochemistry/explore-career-options-with-job-simulations/
Explore career options with job simulations | UAMS Department of Biochemistry and Molecular Biology
Are you a student or postdoc who is uncertain about your career goals? InterSect has job simulations for a wide variety of Ph.D. level scientific career.
explore career optionsdepartment of biochemistryjob simulationsmolecular biologyuams
https://www.simulations-plus.com/resource/molecular-determinants-of-cell-permeability-beyond-the-rule-of-5/
Molecular Determinants of Cell Permeability Beyond the Rule of 5 - Simulations Plus
the rulesimulations plusmoleculardeterminantscell
https://www.nist.gov/publications/molecular-dynamics-simulations-alkylsilane-stationary-phase-order-and-disorder-1
Molecular Dynamics Simulations of Alkylsilane Stationary Phase Order and Disorder. 1. Effects of...
Feb 17, 2017 - Shape-selective polymeric alkylsilane stationary phases are routinely employed over the more common monomeric phases in reversed-phase liquid chromatography (RP
molecular dynamicssimulationsstationaryphaseorder
https://impact.ornl.gov/en/publications/impact-of-multicores-on-large-scale-molecular-dynamics-simulation/
Impact of multicores on large-scale molecular dynamics simulations - Oak Ridge National Laboratory
large scalemolecular dynamicsoak ridgeimpactsimulations
https://vasp.at/forum/viewtopic.php?t=5607
How to set POTIM in molecular dynamics simulations - VASP Forum
how tomolecular dynamicssetsimulationsvasp
https://research.ibm.com/publications/equilibrium-and-dynamic-properties-of-polymethylene-melts-from-molecular-dynamics-simulations-i-n-tridecane
Equilibrium and dynamic properties of polymethylene melts from molecular dynamics simulations. I....
Equilibrium and dynamic properties of polymethylene melts from molecular dynamics simulations. I. n-tridecane for The Journal of Chemical Physics by Grant D....
molecular dynamicsequilibriumpropertiesmeltssimulations
https://elifesciences.org/articles/90061
MDverse, shedding light on the dark matter of molecular dynamics simulations | eLife
Identifying, indexing, and annotating molecular dynamics simulations open data is essential to ensure their proper reuse.
shedding lighton thedark mattermolecular dynamicsmdverse
https://pure.psu.edu/en/publications/molecular-dynamics-simulations-of-organically-modified-layered-si/
Molecular dynamics simulations of organically modified layered silicates - Penn State
molecular dynamicspenn statesimulationsorganicallymodified
https://scriptiebank.be/scriptie/2017/molecular-dynamics-simulations-self-assembled-monolayers-context-area-selective
Molecular dynamics simulations of self-assembled monolayers in the context of area-selective atomic...
molecular dynamicsthe contextsimulationsselfassembled
https://wwwww.easychair.org/publications/keyword/L6Vc
Keyword: molecular dynamics simulations
molecular dynamicskeywordsimulations
https://sciencepublishinggroup.com/article/10.11648/j.ajpa.20160402.11
Interacting Polyelectrolyte Brushes Grafted in Two Bilayers: Molecular Dynamics Simulations,...
Using molecular dynamics simulations, we study interacting polyelectrolyte brushes that are grafted to two parallel surfaces (quasi-Planar Membrane). The...
molecular dynamicsinteractingbrushestwosimulations
https://researchportal.ip-paris.fr/fr/publications/cosub2sub-isolated-line-shapes-by-classical-molecular-dynamics-si/
CO2 isolated line shapes by classical molecular dynamics simulations: Influence of the...
molecular dynamicsisolatedlineshapesclassical
https://orbit.dtu.dk/en/publications/molecular-dynamics-simulations-of-phase-separation-in-the-presenc/
Molecular dynamics simulations of phase separation in the presence of surfactants - Welcome to DTU...
molecular dynamicsphase separationwelcome tosimulationspresence
https://research.utwente.nl/en/publications/molecular-dynamics-simulations-of-aqueous-urea-solutions-near-cry/
Molecular dynamics simulations of aqueous urea solutions near crystalline urea surfaces -...
molecular dynamicssimulationsaqueousureasolutions
https://repository.tudelft.nl/record/uuid:d07a9056-6759-499a-9e32-de5ae765716b
Molecular dynamics simulations of the mechanisms controlling the propagation of bcc/fcc...
molecular dynamicssimulationsmechanismscontrollingpropagation
https://www.cs.cit.tum.de/sccs/aktuelles/aktuelles/article/luis-gall-tuning-of-vectorization-parameters-for-molecular-dynamics-simulations-in-autopas/
Luis Gall: Tuning of Vectorization Parameters for Molecular Dynamics Simulations in AutoPas -...
molecular dynamicsluisgalltuningvectorization
https://researchwith.njit.edu/en/publications/measurements-and-ab-initio-molecular-dynamics-simulations-of-the-/
Measurements and ab initio molecular dynamics simulations of the high temperature ferroelectric...
ab initiomolecular dynamicsthe highmeasurementssimulations
https://cris.iucc.ac.il/en/publications/molecular-dynamics-flexible-fitting-simulations-identify-new-mode/
Molecular Dynamics Flexible Fitting Simulations Identify New Models of the Closed State of the...
molecular dynamicsnew modelsthe closedflexiblefitting
https://www.data.gov.uk/dataset/a0d5f407-9f38-4a3d-b353-f4845134869e/input-parameters-for-ab-initio-molecular-dynamics-simulations-of-water-at-non-ambient-pressure-
Input parameters for ab initio molecular dynamics simulations of water at non-ambient pressure and...
ab initiomolecular dynamicsinputparameterssimulations
https://www.beilstein-journals.org/bjnano/articles/16/141
BJNANO - Molecular and mechanical insights into gecko seta adhesion: multiscale simulations...
Molecular and mechanical insights into gecko seta adhesion: multiscale simulations combining molecular dynamics and the finite element method
molecularmechanicalinsightsgeckoseta
https://collaborate.princeton.edu/en/publications/molecular-dynamics-simulations-of-mach-cones-in-two-dimensional-y/
Molecular dynamics simulations of mach cones in two-dimensional Yukawa crystals - Princeton...
molecular dynamicssimulationsmachconestwo
https://scholars.uky.edu/es/publications/following-the-crystal-growth-of-anthradithiophenes-through-atomis/
Following the crystal growth of anthradithiophenes through atomistic molecular dynamics simulations...
following thecrystal growthmolecular dynamicssimulations