Robuta

https://biomcp.org/ BioMCP Single-binary CLI and MCP server for querying biomedical databases biomcp https://biomcp.org/sources/ddinter/ DDInter MCP Tool for Drug-Drug Interactions | BioMCP - BioMCP Use BioMCP to query DDInter-backed drug-drug interactions, severity levels, and class summaries through the local DDInter CSV bundle. mcp tooldruginteractionsbiomcp https://biomcp.org/user-guide/cli-reference/ CLI Reference - BioMCP Single-binary CLI and MCP server for querying biomedical databases cli referencebiomcp https://biomcp.org/getting-started/api-keys/ API Keys - BioMCP Single-binary CLI and MCP server for querying biomedical databases api keysbiomcp https://biomcp.org/getting-started/claude-desktop/ Claude Desktop - BioMCP Single-binary CLI and MCP server for querying biomedical databases claude desktopbiomcp https://biomcp.org/charts/violin/ Violin - BioMCP Single-binary CLI and MCP server for querying biomedical databases violinbiomcp https://biomcp.org/reference/faq/ FAQ - BioMCP Single-binary CLI and MCP server for querying biomedical databases faqbiomcp https://biomcp.org/sources/clinvar/ ClinVar MCP Tool for Variant Interpretation | BioMCP - BioMCP Use BioMCP to pull ClinVar clinical significance, review status, and disease context for human variants through one variant lookup workflow. mcp toolvariant interpretationclinvarbiomcp https://biomcp.org/sources/oncokb/ OncoKB MCP Tool for Oncology Variant Annotation | BioMCP - BioMCP Use BioMCP to run the explicit OncoKB variant helper for oncogenicity, evidence levels, and treatment implications on actionable variants. mcp tooloncologyvariantannotationbiomcp https://biomcp.org/charts/heatmap/ Heatmap - BioMCP Single-binary CLI and MCP server for querying biomedical databases heatmapbiomcp https://biomcp.org/charts/stacked-bar/ Stacked Bar - BioMCP Single-binary CLI and MCP server for querying biomedical databases stackedbarbiomcp https://biomcp.org/user-guide/protein/ Protein - BioMCP Single-binary CLI and MCP server for querying biomedical databases proteinbiomcp https://biomcp.org/blog/skillbench-biomcp-skills/ Healthcare Agents Need Skills, Not Just Models - BioMCP Single-binary CLI and MCP server for querying biomedical databases agents needhealthcareskillsmodelsbiomcp https://biomcp.org/sources/human-protein-atlas/ Human Protein Atlas MCP Tool for Tissue Expression | BioMCP - BioMCP Use BioMCP to surface Human Protein Atlas tissue expression and localization data through the BioMCP gene hpa section. human proteinmcp toolatlastissueexpression https://biomcp.org/reference/article-keyword-search/ Article Keyword Search - BioMCP Single-binary CLI and MCP server for querying biomedical databases keyword searcharticlebiomcp https://biomcp.org/sources/seer/ SEER Explorer MCP Tool for Cancer Survival | BioMCP - BioMCP Use BioMCP to surface SEER Explorer 5-year relative survival summaries for mapped cancers in the BioMCP disease survival section. mcp toolseerexplorercancersurvival https://github.com/genomoncology/biomcp GitHub - genomoncology/biomcp: BioMCP: Biomedical Model Context Protocol · GitHub BioMCP: Biomedical Model Context Protocol. Contribute to genomoncology/biomcp development by creating an account on GitHub. model context protocolgithubgenomoncologybiomcpbiomedical https://biomcp.org/sources/pharmgkb/ PharmGKB and CPIC MCP Tool for Pharmacogenomics | BioMCP - BioMCP Use BioMCP to search CPIC-backed PGx guidance and add PharmGKB clinical annotations to gene-drug pharmacogenomic workflows. mcp toolpharmacogenomicsbiomcp https://biomcp.org/sources/cbioportal/ cBioPortal MCP Tool for Cohort Variant Context | BioMCP - BioMCP Use BioMCP to add cBioPortal cohort-frequency context to variants and download local study datasets for BioMCP study analytics. mcp toolcohortvariantcontextbiomcp https://biomcp.org/sources/ Biomedical Data Sources for AI Agents | BioMCP - BioMCP Explore BioMCP source guides for PubMed, ClinicalTrials.gov, ClinVar, OpenFDA, CDC WONDER VAERS, UniProt, gnomAD, Reactome, Semantic Scholar, ChEMBL,... biomedical dataai agentssourcesbiomcp https://biomcp.org/user-guide/disease/ Disease - BioMCP Single-binary CLI and MCP server for querying biomedical databases diseasebiomcp https://biomcp.org/user-guide/variant/ Variant - BioMCP Single-binary CLI and MCP server for querying biomedical databases variantbiomcp https://biomcp.org/how-to/guide-workflows/ Guide Workflows - BioMCP Single-binary CLI and MCP server for querying biomedical databases guideworkflowsbiomcp https://biomcp.org/sources/who-prequalification/ WHO Prequalification MCP Tool for Global Drug Access | BioMCP - BioMCP Use BioMCP to search WHO Prequalification-backed drug and vaccine records in BioMCP and retrieve global regulatory context through the local WHO... mcp toolprequalificationglobaldrugaccess https://biomcp.org/charts/survival/ Survival - BioMCP Single-binary CLI and MCP server for querying biomedical databases survivalbiomcp https://biomcp.org/user-guide/drug/ Drug - BioMCP Single-binary CLI and MCP server for querying biomedical databases drugbiomcp https://biomcp.org/sources/civic/ CIViC MCP Tool for Clinical Variant Evidence | BioMCP - BioMCP Use BioMCP to surface CIViC evidence, disease-associated variants, and therapy context across BioMCP variant, gene, drug, and disease workflows. mcp toolcivicclinicalvariantevidence https://biomcp.org/reference/dependencies/ Dependencies - BioMCP Single-binary CLI and MCP server for querying biomedical databases dependenciesbiomcp https://biomcp.org/reference/quick-reference/ Quick Reference - BioMCP Single-binary CLI and MCP server for querying biomedical databases quick referencebiomcp https://biomcp.org/sources/reactome/ Reactome MCP Tool for Pathway Analysis | BioMCP - BioMCP Use BioMCP to search Reactome pathways, inspect pathway genes and events, and connect pathway context to downstream trial and article workflows. mcp toolpathwayanalysisbiomcp https://biomcp.org/user-guide/gwas/ GWAS - BioMCP Single-binary CLI and MCP server for querying biomedical databases gwasbiomcp https://biomcp.org/reference/source-versioning/ Source Versioning - BioMCP Single-binary CLI and MCP server for querying biomedical databases sourceversioningbiomcp https://biomcp.org/policies/ Privacy Policy - BioMCP Single-binary CLI and MCP server for querying biomedical databases privacy policybiomcp https://biomcp.org/concepts/what-is-biomcp/ What is BioMCP? - BioMCP Single-binary CLI and MCP server for querying biomedical databases biomcp https://biomcp.org/sources/openfda/ OpenFDA MCP Tool for Drug Safety Workflows | BioMCP - BioMCP Use BioMCP to query OpenFDA adverse events, recalls, device reports, labels, and approval context for drug safety and surveillance workflows. mcp tooldrug safetyworkflowsbiomcp https://biomcp.org/sources/kegg/ KEGG MCP Tool for Pathway Search | BioMCP - BioMCP Use BioMCP to search KEGG pathways, fetch KEGG pathway summaries, and expand to pathway genes without learning KEGG's flat-file API. mcp toolkeggpathwaysearchbiomcp https://biomcp.org/how-to/cross-entity-pivots/ Cross-Entity Pivots - BioMCP Single-binary CLI and MCP server for querying biomedical databases crossentitypivotsbiomcp https://biomcp.org/reference/source-licensing/ Source Licensing - BioMCP Single-binary CLI and MCP server for querying biomedical databases sourcelicensingbiomcp https://biomcp.org/getting-started/skills/ Skills - BioMCP Single-binary CLI and MCP server for querying biomedical databases skillsbiomcp https://biomcp.org/how-to/annotate-variants/ Annotate Variants - BioMCP Single-binary CLI and MCP server for querying biomedical databases annotatevariantsbiomcp https://biomcp.org/user-guide/article/ Article - BioMCP Single-binary CLI and MCP server for querying biomedical databases articlebiomcp https://biomcp.org/user-guide/adverse-event/ Adverse Event - BioMCP Single-binary CLI and MCP server for querying biomedical databases adverse eventbiomcp https://biomcp.org/sources/who-ivd/ WHO Prequalified IVD MCP Tool for Infectious Disease Diagnostics | BioMCP - BioMCP Use BioMCP to search WHO prequalified infectious-disease diagnostics, fetch source-native WHO IVD product cards, and manage the local WHO IVD CSV lifecycle... mcp toolinfectious diseaseprequalifiedivddiagnostics https://biomcp.org/sources/cdc-cvx/ CDC CVX/MVX MCP Tool for Vaccine Identity Bridge | BioMCP - BioMCP Use BioMCP to bridge vaccine brand names into EMA-backed drug matches and explicit WHO vaccine searches with the local CDC CVX, trade-name, and MVX bundle. mcp toolcdccvxvaccineidentity https://biomcp.org/blog/cbioportal-study-analytics/ cBioPortal Study Analytics in BioMCP - BioMCP Single-binary CLI and MCP server for querying biomedical databases studyanalyticsbiomcp https://biomcp.org/blog/daraxonrasib-six-commands/ Daraxonrasib: Exploring a Breakthrough Cancer Drug in 6 BioMCP Commands - BioMCP Single-binary CLI and MCP server for querying biomedical databases cancer drugexploringbreakthroughbiomcpcommands https://biomcp.org/how-to/search-all-workflow/ Search All Workflow - BioMCP Single-binary CLI and MCP server for querying biomedical databases searchworkflowbiomcp https://biomcp.org/user-guide/phenotype/ Phenotype - BioMCP Single-binary CLI and MCP server for querying biomedical databases phenotypebiomcp https://biomcp.org/blog/we-deleted-35-tools/ We Deleted 35 Tools and Our Agent Got Better - BioMCP Single-binary CLI and MCP server for querying biomedical databases got betterdeletedtoolsagentbiomcp https://biomcp.org/reference/data-sources/ Data Sources - BioMCP Single-binary CLI and MCP server for querying biomedical databases data sourcesbiomcp https://biomcp.org/reference/error-codes/ Error Codes - BioMCP Single-binary CLI and MCP server for querying biomedical databases error codesbiomcp https://biomcp.org/getting-started/remote-http/ Remote HTTP Server - BioMCP Single-binary CLI and MCP server for querying biomedical databases http serverremotebiomcp https://biomcp.org/blog/kras-g12c-treatment-landscape/ KRAS G12C Treatment Landscape in 7 Commands - BioMCP Single-binary CLI and MCP server for querying biomedical databases krastreatmentlandscapecommandsbiomcp https://biomcp.org/how-to/find-trials/ Find Trials - BioMCP Single-binary CLI and MCP server for querying biomedical databases findtrialsbiomcp https://biomcp.org/how-to/skill-validation/ Skill Validation - BioMCP Single-binary CLI and MCP server for querying biomedical databases skillvalidationbiomcp https://biomcp.org/charts/pie/ Pie - BioMCP Single-binary CLI and MCP server for querying biomedical databases piebiomcp https://biomcp.org/blog/biomcp-charts/ Generate Charts Easily from Study Data - BioMCP Single-binary CLI and MCP server for querying biomedical databases generatechartseasilystudydata https://biomcp.org/reference/bioasq-benchmark/ BioASQ Benchmark - BioMCP Single-binary CLI and MCP server for querying biomedical databases benchmarkbiomcp https://biomcp.org/charts/ridgeline/ Ridgeline - BioMCP Single-binary CLI and MCP server for querying biomedical databases ridgelinebiomcp https://biomcp.org/user-guide/gene/ Gene - BioMCP Single-binary CLI and MCP server for querying biomedical databases genebiomcp https://biomcp.org/sources/pubmed/ PubMed MCP Tool for AI Agents | BioMCP - BioMCP Search PubMed in BioMCP with PubTator3 annotations, article summaries, and PMC full-text handoff so AI agents can review literature faster. mcp toolai agentspubmedbiomcp https://biomcp.org/sources/clinicaltrials-gov/ ClinicalTrials.gov MCP Tool for AI Agents | BioMCP - BioMCP Search ClinicalTrials.gov from BioMCP for recruiting studies, eligibility criteria, locations, and trial details without learning the native API. mcp toolai agentsclinicaltrialsbiomcp