https://pubmed.ncbi.nlm.nih.gov/33659350/
Data generated by metagenomic and metatranscriptomic experiments is both enormous and inherently noisy. When using taxonomy-dependent alignment-based methods...
search resultshoseinworkflowintegratingvarious
https://www.mdpi.com/2076-2607/12/1/16
Fermented milk products (FMPs) contain probiotics that are live bacteria considered to be beneficial to human health due to the production of various bioactive...
metagenomicinsightstaxonomicfunctionalfeatures
https://pubmed.ncbi.nlm.nih.gov/39129757/
The role of the Huanan Seafood Market in the early severe acute respiratory syndrome virus 2 (SARS-CoV-2) outbreak remains unclear. Recently, the Chinese...
sars covassociationmetagenomiccontentsamples
https://asm.org/podcasts/mtm/episodes/metagenomic-sequencing-for-infectious-diseases-dia
Charles Chiu discusses his work to move metagenomic sequencing-based tests into the clinical microbiology lab for diagnosis of infectious disease.
infectious diseasesmetagenomicsequencingdiagnosticscharles
https://link.springer.com/article/10.1186/s40168-025-02276-7?error=cookies_not_supported&code=32e5f3e2-f854-4239-92a1-6c24e1f0672b
Dec 4, 2025 - Airborne microbial communities, although often challenging to study due to low biomass, play crucial roles in public health and pathogen transmission. Thro
microbial communitiesmetagenomicprofilingairborneaircraft
https://github.com/segatalab/panphlan
PanPhlAn is a strain-level metagenomic profiling tool for identifying the gene composition of individual strains in metagenomic samples - SegataLab/panphlan
is agithubstrainlevelmetagenomic
https://www.frontiersin.org/journals/cellular-and-infection-microbiology/articles/10.3389/fcimb.2021.745156/full
The diagnosis of infection-led fever of unknown origin (FUO) is still challenging, causing an difficulty for physicians to prescribe an early efficacious tre...
next generation sequencingfrontiersclinicalutilizationmetagenomic