https://pubmed.ncbi.nlm.nih.gov/41411773/
Spatial transcriptomics uncovers lipid metabolic dysregulation driving immune-stroma crosstalk in...
National Natural Science Foundation of China (82104484,32301084), Joint funding from schools (colleges) and enterprises in Guangzhou (2025A03J3203,...
spatial transcriptomicslipidmetabolic
https://research-repository.uwa.edu.au/en/publications/spatial-transcriptomics-reveals-discrete-tumour-microenvironments/
Spatial transcriptomics reveals discrete tumour microenvironments and autocrine loops within...
spatial transcriptomicsrevealsdiscretetumourloops
https://scholars.duke.edu/publication/1696698
Scholars@Duke publication: Multi-region spatial transcriptomics reveals region specific differences...
spatial transcriptomicsscholarsdukepublicationmulti
https://pubmed.ncbi.nlm.nih.gov/35765645/
Emerging artificial intelligence applications in Spatial Transcriptomics analysis
Spatial transcriptomics (ST) has advanced significantly in the last few years. Such advancement comes with the urgent need for novel computational methods to...
artificial intelligencespatial transcriptomicsemergingapplicationsanalysis
https://conservancy.umn.edu/items/2c46625f-746b-4254-9ffc-f9a4136385de
BidCell and Baysor on Large-Scale Single-Cell and Spatial Transcriptomics Datasets
The purpose of this research is to examine the different types of packages that can be used for cell segmentation, specifically on much larger datasets. The...
large scalesingle cellspatial transcriptomics
https://pmc.ncbi.nlm.nih.gov/articles/PMC12583788/
Spatial Transcriptomics of Adipose Tissue: Technologies, Applications, and Challenges - PMC
Adipose tissue is a complex metabolic and endocrine organ that plays a central role in systemic energy homeostasis. While single-cell and single-nucleus RNA...
spatial transcriptomicsadipose tissuetechnologiesapplicationschallenges
https://dbbs.wustl.edu/tag/tumor-heterogeneity-single-cell-spatial-transcriptomics-head-and-neck-cancer-signaling/
tumor heterogeneity; single cell; spatial transcriptomics; head and neck cancer; signaling Archives...
head and neck cancersingle cellspatial transcriptomics
https://experts.arizona.edu/en/publications/single-cell-and-spatial-transcriptomics-identified-fatty-acid-bin/
Single-Cell and Spatial Transcriptomics Identified Fatty Acid-Binding Proteins Controlling...
single cellspatial transcriptomicsfatty acid
https://data.mendeley.com/datasets/nh8797sjr6/1
Spatial transcriptomics of human placentas reveal distinct RNA patterns associated with morphology...
The deposited data is presented in the manuscript by Bhalla N et al., with the title "Spatial transcriptomics of human placentas reveal distinct RNA patterns...
spatial transcriptomics
https://carpentries-incubator.github.io/spatial-transcriptomics/final-exercise.html
Spatial Transcriptomics: Putting it all Together
spatial transcriptomicsputtingtogether
https://about.uq.edu.au/experts/project/64350
Predicting vulvar cancer metastasis with spatial transcriptomics | Project | UQ Experts
vulvar cancerspatial transcriptomicspredictingmetastasisproject
https://dibs.duke.edu/event/spatial-transcriptomics-reveals-effects-recording-and-stimulating-electrodes-neural-tissue/
Spatial transcriptomics reveals effects of recording and stimulating electrodes on neural tissue |...
Spatial transcriptomics reveals effects of recording and stimulating electrodes on neural tissue
spatial transcriptomics
https://zitniklab.hms.harvard.edu/projects/CONCERT/
CONCERT predicts niche-aware perturbation responses in spatial transcriptomics | Zitnik Lab
virtual cell models, perturbation prediction, spatial modeling, generative model
spatial transcriptomicsconcertpredictsnicheaware
https://anesthesiology.weill.cornell.edu/publications/spatial-transcriptomics-combined-with-single-nucleus-rna-sequencing-reveals-glial-cell
Spatial transcriptomics combined with single-nucleus RNA sequencing reveals glial cell...
spatial transcriptomicsrna sequencingcombinedsingle
https://brain.harvard.edu/hbi_events/hbi-101-talk-jeff-moffitt/
Spatial Transcriptomics 101 - Harvard Brain Science Initiative
spatial transcriptomicsbrain scienceharvardinitiative
https://carpentries-incubator.github.io/spatial-transcriptomics/introduction.html
Spatial Transcriptomics: Spatially Resolved Transcriptomics in Life Sciences Research
spatial transcriptomicsin liferesolvedsciencesresearch
https://carpentries-incubator.github.io/spatial-transcriptomics/instructor/index.html
Spatial Transcriptomics: Summary and Schedule
spatial transcriptomicssummaryschedule
https://dukespace.lib.duke.edu/items/430fa9e2-5611-417d-b77e-191e16c10a98/full
Spatial transcriptomics reveals segregation of tumor cell states in glioblastoma and marked...
Glioblastoma (GBM) remains an untreatable malignant tumor with poor patient outcomes, characterized by palisading necrosis and microvascular proliferation....
spatial transcriptomics
https://insights.princeton.edu/2023/08/modeling-spatial-transcriptomics/
Belayer: Modeling Layered Tissues in Spatial Transcriptomics - Princeton Insights
Aug 9, 2023 - Have you ever wondered how scientists can use computational models to investigate cellular layers of biological tissue? Check out @tamjazad's article on how...
spatial transcriptomicsbelayermodelinglayeredtissues
https://cordis.europa.eu/project/id/101138356/results/es
Spatial transcriptomics chips with sequencing-based microscopy | MESH_CHIP | Proyecto | Resultados...
Deliverables, publications, datasets, software, exploitable results
spatial transcriptomicschipssequencing
https://intra.kth.se/en/aktuellt/kalender/development-and-application-of-spatial-transcriptomics-methods-1.1272966?date=2023-09-29&orgdate=2023-01-27&length=1&orglength=339
Development and application of spatial transcriptomics methods | KTH
spatial transcriptomicsdevelopmentapplicationmethodskth
https://intra.kth.se/en/cbh/cbh-kalender/disputationer/advancing-spatial-transcriptomics-1.1453530
Advancing Spatial Transcriptomics | CBH internal pages
From Method Development to Biological Insights
spatial transcriptomicsadvancingcbhinternalpages
https://carpentries-incubator.github.io/spatial-transcriptomics/data-preprocessing.html
Spatial Transcriptomics: Data Preprocessing
spatial transcriptomicsdatapreprocessing
https://scholarworks.indianapolis.iu.edu/items/241eab1d-2a5e-46f4-b62d-a81dc507c8fa
Spatial Transcriptomics of Intraductal Papillary Mucinous Neoplasms of The Pancreas Identifies...
Intraductal papillary mucinous neoplasms (IPMN) of the pancreas are bona fide precursor lesions of pancreatic ductal adenocarcinoma (PDAC). The most common...
spatial transcriptomicsthe pancreasneoplasmsidentifies
https://pubmed.ncbi.nlm.nih.gov/39237549/
Spatial transcriptomics defines injury specific microenvironments and cellular interactions in...
Kidney injury disrupts the intricate renal architecture and triggers limited regeneration, together with injury-invoked inflammation and fibrosis. Deciphering...
spatial transcriptomicsdefinesinjuryspecificcellular
https://portal.fis.tum.de/en/publications/spatial-transcriptomics-combined-with-single-cell-rna-sequencing-/
Spatial transcriptomics combined with single-cell RNA-sequencing unravels the complex inflammatory...
single cell rna sequencingspatial transcriptomics
https://www.kth.se/om/upptack/kalender/disputationer/advancing-spatial-transcriptomics-1.1453530
Advancing Spatial Transcriptomics | KTH
From Method Development to Biological Insights
spatial transcriptomicsadvancingkth
https://pubmed.ncbi.nlm.nih.gov/38065970/
STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping
Spatial transcriptomics (ST) technologies enable high throughput gene expression characterization within thin tissue sections. However, comparing spatial...
spatial transcriptomicsalignmentdatausingmetric
https://research.tudelft.nl/en/publications/spacewalker-enables-interactive-gradient-exploration-for-spatial-/
SpaceWalker enables interactive gradient exploration for spatial transcriptomics data - TU Delft...
spatial transcriptomicsspacewalkerinteractivegradientexploration
https://pubmed.ncbi.nlm.nih.gov/41053019/
Integrating cross-sample and cross-modal data for spatial transcriptomics and metabolomics with...
Simultaneous profiling of spatial transcriptomics (ST) and spatial metabolomics (SM) on the same or adjacent tissue sections offers a revolutionary approach to...
spatial transcriptomicsintegratingcrosssamplemodal
https://pubmed.ncbi.nlm.nih.gov/40236029/
Spatial transcriptomics AI agent charts hPSC-pancreas maturation in vivo
Spatial transcriptomics has revolutionized our understanding of tissue organization by simultaneously capturing gene expression and spatial localization within...
spatial transcriptomicsai agentchartshpscpancreas
https://pmc.ncbi.nlm.nih.gov/articles/PMC12495838/
Integrating bulk RNA-seq, scRNA-seq, and spatial transcriptomics data to identify novel...
Hepatocellular carcinoma (HCC) poses considerable difficulties regarding the prognosis and the assessment of treatment efficacy. Additionally, while it is...
rna seq
https://edoc.ub.uni-muenchen.de/36408/
Investigating computational strategies for domain identification in spatial transcriptomics
investigatingcomputationalstrategiesdomainidentification
https://mohanlab.bme.uh.edu/bruton-2/
Spatial Transcriptomics of Hypoxia and Immune-Mediated Damage in Lupus Nephritis | MOHAN LAB
https://infoscience.epfl.ch/entities/publication/13a9559c-46f4-4669-a677-d1f6d8ffc135/statistics
Single-Cell Transcriptomics Reveals that Differentiation and Spatial Signatures Shape Epidermal and...
The murine epidermis with its hair follicles represents an invaluable model system for tissue regeneration and stem cell research. Here we used single-cell...
single cell transcriptomicsreveals
https://handbook.monash.edu/2026/units/bms5309
BMS5309 - Advanced transcriptomics: Bulk, single-cell, and spatial analysis - Monash University
This is the official site of the Monash University Handbook for course and unit information.
single cellspatial analysisadvancedtranscriptomicsbulk
https://pubmed.ncbi.nlm.nih.gov/41915328/
Integrating spatial and single-cell transcriptomics analysis reveals MYCN-UBE2C-TFRC signaling...
MYCN amplification is a recurrent, high-risk molecular hallmark across diverse tumors, most notably neuroectodermal malignancies. Although MYCN-driven tumors...
single cell transcriptomics
https://www.researchandmarkets.com/reports/5748577/global-spatial-genomics-transcriptomics-market
Global Spatial Genomics and Transcriptomics Market
The Global Spatial Genomics and Transcriptomics Market, valued at USD 1.5B in 2022, is projected to reach USD 2.5B by 2027, growing at a 10.8% CAGR.
spatial genomicsglobaltranscriptomicsmarket
https://experts.arizona.edu/en/publications/validation-of-label-free-optical-imaging-markers-of-pancreatic-ca/
Validation of label-free optical imaging markers of pancreatic cancer using spatial transcriptomics...
label freeoptical imaging
https://pubmed.ncbi.nlm.nih.gov/38649737/
Integrated single-cell RNA sequencing and spatial transcriptomics analysis reveals the tumour...
Integrated single-cell RNA sequencing and spatial transcriptomics analysis reveals the tumour microenvironment in patients with endometrial cancer responding...
single cell rna sequencing
https://www.researchandmarkets.com/reports/5176389/spatial-genomics-and-transcriptomics-market
Spatial Genomics and Transcriptomics Market - Growth, Trends, COVID-19 Impact, and Forecasts...
Spatial Genomics and Transcriptomics Market - Growth, Trends, COVID-19 Impact, and Forecasts (2023-2028)
spatial genomicsmarket growthtranscriptomics
https://dbei.med.upenn.edu/publication/dr-mingyao-lis-nature-publication-spatial-transcriptomics-reveals-human-cortical-layer-and-area-specification/
Dr. Mingyao Li's Nature Publication, "Spatial Transcriptomics Reveals Human Cortical Layer and Area...
Sep 3, 2025 - Read about Dr. Mingyao Li's recent publication in Nature, which maps early human brain development using spatial transcriptomics. The study reveals that...