https://pubmed.ncbi.nlm.nih.gov/21030441/
The BRENDA Tissue Ontology (BTO): the first all-integrating ontology of all organisms for enzyme...
BTO, the BRENDA Tissue Ontology (http://www.BTO.brenda-enzymes.org) represents a comprehensive structured encyclopedia of tissue terms. The project started in...
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https://github.com/ontio
Ontology · GitHub
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https://writings.stephenwolfram.com/2017/07/the-practical-business-of-ontology-a-tale-from-the-front-lines/
The Practical Business of Ontology: A Tale from the Front Lines—Stephen Wolfram Writings
Philosophy meets chemistry in discussing and deciding how to handle chemicals and chemical structures in the design of the Wolfram Language.
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https://pubmed.ncbi.nlm.nih.gov/36271389/
A comprehensive update on CIDO: the community-based coronavirus infectious disease ontology - PubMed
CIDO represents entities and relations in the domain of coronavirus diseases with a special focus on COVID-19. It supports shared knowledge representation,...
the communityinfectious diseasecomprehensiveupdatebased
https://pubmed.ncbi.nlm.nih.gov/20547776/
The teleost anatomy ontology: anatomical representation for the genomics age - PubMed
The rich knowledge of morphological variation among organisms reported in the systematic literature has remained in free-text format, impractical for use in...
anatomyontologyrepresentationgenomicsage
https://pubmed.ncbi.nlm.nih.gov/21261995/
Worm Phenotype Ontology: integrating phenotype data within and beyond the C. elegans community -...
We provide a phenotype ontology (WPO) that will help to facilitate data retrieval, and cross-species comparisons within the nematode community. In the larger...
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https://www.nfdi4datascience.de/services/4dsontology/
NFDI4DS Ontology - Link | NFDI4DS
NFDI for Data Science and AI.
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https://www.intechopen.com:443/chapters/78365
Ontology in Quantum Mechanics | IntechOpen
It is suspected that the quantum evolution equations describing the micro-world as we know it are of a special kind that allows transformations to a special...
quantum mechanicsontology
https://pubmed.ncbi.nlm.nih.gov/31304272/
FoodOn: a harmonized food ontology to increase global food traceability, quality control and data...
The construction of high capacity data sharing networks to support increasing government and commercial data exchange has highlighted a key roadblock: the...
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https://spdx.dev/spdx-3-1-ontology-and-schema-available-for-review/
SPDX 3.1 Ontology and Schema Available for Review – SPDX
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https://www.w3.org/TR/owl2-new-features/
OWL 2 Web Ontology Language New Features and Rationale (Second Edition)
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https://www.w3.org/TR/2009/REC-owl2-overview-20091027/
OWL 2 Web Ontology Language Document Overview
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https://geneontology.org/
Gene Ontology Resource
The Gene Ontology (GO) project is a major bioinformatics initiative to develop a computational representation of our evolving knowledge of how genes encode...
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URENIO | Intelligent Cities – Smart Cities – Innovation Ecosystems - Smart City Ontology -...
Smart City Ontology - Applications - Projects
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https://pubmed.ncbi.nlm.nih.gov/34318308/
Planarian Anatomy Ontology: a resource to connect data within and across experimental platforms -...
As the planarian research community expands, the need for an interoperable data organization framework for tool building has become increasingly apparent. Such...
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https://pubmed.ncbi.nlm.nih.gov/25068035/
The Software Ontology (SWO): a resource for reproducibility in biomedical data analysis, curation...
The Software Ontology is available under an Apache 2.0 license at http://theswo.sourceforge.net/; the Software Ontology blog can be read at...
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https://pubmed.ncbi.nlm.nih.gov/24177753/
Analyzing gene expression data in mice with the Neuro Behavior Ontology - PubMed
We have applied the Neuro Behavior Ontology (NBO), an ontology for the annotation of behavioral gene functions and behavioral phenotypes, to the annotation of...
gene expressionanalyzingdatamiceneuro
https://www.w3.org/standards/history/webont-req/
OWL Web Ontology Language Use Cases and Requirements publication history | Standards | W3C
The World Wide Web Consortium (W3C) is an international community where Member organizations, a full-time staff, and the public work together to develop Web...
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Ontology: Theory and History
Ontology in Contemporary Philosophy, its Historical Relationship with Metaphysics and Logic, Bibliographies on Ontological Topics
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https://pubmed.ncbi.nlm.nih.gov/22293552/
Uberon, an integrative multi-species anatomy ontology - PubMed
We present Uberon, an integrated cross-species ontology consisting of over 6,500 classes representing a variety of anatomical entities, organized according to...
integrativemultispeciesanatomyontology
https://pubmed.ncbi.nlm.nih.gov/23658422/
FYPO: the fission yeast phenotype ontology - PubMed
FYPO releases are available from the Subversion repository at the PomBase SourceForge project page...
fissionyeastphenotypeontologypubmed
https://www.routledge.com/Parasitic-Personhood-and-the-Ontology-of-Eating/Heldke/p/book/9781032711546
Parasitic Personhood and the Ontology of Eating - 1st Edition - Lisa H
Humans must eat, and our eating involves us in a cascade of eating relationships that leave life and death biting into each other. These realities should—but
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https://pubmed.ncbi.nlm.nih.gov/39695140/
Core reference ontology for individualized exercise prescription - PubMed
corereferenceontologyexerciseprescription
https://hpo.jax.org/app/
Human Phenotype Ontology
Human Phenotype Ontology, a standardized vocabulary of phenotypic abnormalities encountered in human disease. With unmatched depth it enables clinicians to...
humanphenotypeontology
https://pubmed.ncbi.nlm.nih.gov/24138933/
The Drosophila phenotype ontology - PubMed
The DPO provides a set of well-defined terms for annotating Drosophila phenotypes and for grouping and querying the resulting annotation sets in biologically...
drosophilaphenotypeontologypubmed
https://philosophy.stackexchange.com/questions/tagged/ontology
Newest 'ontology' Questions - Philosophy Stack Exchange
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https://owasp.org/www-project-ontology-driven-threat-modeling-framework/
OWASP Ontology Driven Threat Modeling Framework | OWASP Foundation
OWASP Ontology-driven Threat Modelling (OdTM) framework is a set of means for implementation of an ontological approach into automatic threat modelling of...
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https://www.w3.org/TR/2004/REC-owl-ref-20040210/
OWL Web Ontology Language Reference
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https://www.w3.org/standards/history/vocab-ssn-2023/
Semantic Sensor Network Ontology - 2023 Edition publication history | Standards | W3C
The World Wide Web Consortium (W3C) is an international community where Member organizations, a full-time staff, and the public work together to develop Web...
2023 editionsemanticsensornetworkontology
https://earthmicrobiome.ucsd.edu/protocols-and-standards/empo/
EMP Ontology (EMPO) : earthmicrobiome
Earth Microbiome Project
empontology
https://info.credly.com/product/workforce/data-quality
Product Feature - Skills Ontology
product featureskillsontology
https://pubmed.ncbi.nlm.nih.gov/15089751/
IMGT-ONTOLOGY for immunogenetics and immunoinformatics - PubMed
IMGT, the international ImMunoGeneTics information system(R) (http://imgt.cines.fr), is a high quality integrated knowledge resource specializing in...
ontologypubmed
https://www.academia.edu/64979615/Comparing_Ontology_Development_Tools_Based_on_an_Online_Survey
(PDF) Comparing Ontology Development Tools Based on an Online Survey
Nov 27, 2024 - Abstract— Finding an appropriate tool to develop ontology is the first step towards ontology development. A lot of ontology development tools are available...
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https://www.w3.org/standards/history/prov-o/
PROV-O: The PROV Ontology publication history | Standards | W3C
The World Wide Web Consortium (W3C) is an international community where Member organizations, a full-time staff, and the public work together to develop Web...
ontologypublicationhistorystandardsw3c
https://pubmed.ncbi.nlm.nih.gov/21209921/
A gross anatomy ontology for hymenoptera - PubMed
Hymenoptera is an extraordinarily diverse lineage, both in terms of species numbers and morphotypes, that includes sawflies, bees, wasps, and ants. These...
grossanatomyontologyhymenopterapubmed
https://pubmed.ncbi.nlm.nih.gov/18950739/
The Human Phenotype Ontology: a tool for annotating and analyzing human hereditary disease - PubMed
There are many thousands of hereditary diseases in humans, each of which has a specific combination of phenotypic features, but computational analysis of...
a toolhumanphenotypeontologyanalyzing
https://github.com/rsc-ontology/rxno
GitHub - rsc-ontology/rxno: Name Reaction Ontology · GitHub
Name Reaction Ontology. Contribute to rsc-ontology/rxno development by creating an account on GitHub.
githubrscontologynamereaction
https://pubmed.ncbi.nlm.nih.gov/21632790/
From IMGT-ONTOLOGY CLASSIFICATION Axiom to IMGT standardized gene and allele nomenclature: for...
From IMGT-ONTOLOGY CLASSIFICATION Axiom to IMGT standardized gene and allele nomenclature: for immunoglobulins (IG) and T cell receptors (TR)
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https://prometheux.ai/
Prometheux | Ontology Engine for Enterprise AI
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https://pubmed.ncbi.nlm.nih.gov/34986598/
ECO: the Evidence and Conclusion Ontology, an update for 2022 - PubMed
The Evidence and Conclusion Ontology (ECO) is a community resource that provides an ontology of terms used to capture the type of evidence that supports...
the evidencean updateecoconclusionontology
https://disease-ontology.org/
Disease Ontology - Institute for Genome Sciences @ University of Maryland
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https://www.w3.org/TR/owl2-rdf-based-semantics/
OWL 2 Web Ontology Language RDF-Based Semantics (Second Edition)
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https://www.w3.org/TR/owl2-quick-reference/
OWL 2 Web Ontology Language Quick Reference Guide (Second Edition)
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https://hpo.jax.org/
Human Phenotype Ontology
Human Phenotype Ontology, a standardized vocabulary of phenotypic abnormalities encountered in human disease. With unmatched depth it enables clinicians to...
humanphenotypeontology
https://www.geneontology.org/
Gene Ontology Resource
The Gene Ontology (GO) project is a major bioinformatics initiative to develop a computational representation of our evolving knowledge of how genes encode...
geneontologyresource
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https://pubmed.ncbi.nlm.nih.gov/18629098/
Building a cell and anatomy ontology of Caenorhabditis elegans - PubMed
We are endowed with a rich knowledge about Caenorhabditis elegans. Its stereotyped anatomy and development has stimulated research and resulted in the...
buildingcellanatomyontologypubmed
https://pubmed.ncbi.nlm.nih.gov/27842607/
The flora phenotype ontology (FLOPO): tool for integrating morphological traits and phenotypes of...
The FLOPO is primarily intended as a framework based on which plant traits can be integrated computationally across all species and higher taxa of flowering...
floraphenotypeontologytoolintegrating
https://marketontology.com/
Market Ontology - Macro, Policy & Geopolitical Market Impact
Market Ontology maps how geopolitical shocks, policy decisions, and central bank moves propagate through rates, credit, currencies, and commodities. Live...
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https://totogi.com/
One Telco Ontology. Infinite AI Use Cases | Totogi
Apr 1, 2026 - Totogi gives AI one unified understanding of your entire BSS, OSS and network stack – so it can reason, decide, and act across your telco. Learn more.
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https://www.wikidata.org/wiki/Q4866972
Basic Formal Ontology - Wikidata
top-level ontology developed to promote interoperability among domain ontologies
basicformalontologywikidata
https://www.w3.org/TR/2004/REC-webont-req-20040210/
OWL Web Ontology Language Use Cases and Requirements
use casesowlwebontologylanguage
https://www.w3.org/2006/04/OWL_UseCases-ru.html
OWL Web Ontology Language Use Cases and Requirements
use casesowlwebontologylanguage
https://www.w3.org/TR/owl-time/
Time Ontology in OWL
OWL-Time is an OWL-2 DL ontology of temporal concepts, for describing the temporal properties of resources in the world or described in Web pages. The ontology...
timeontologyowl
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https://pubmed.ncbi.nlm.nih.gov/23060432/
The Units Ontology: a tool for integrating units of measurement in science - PubMed
Units are basic scientific tools that render meaning to numerical data. Their standardization and formalization caters for the report, exchange, process,...
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https://pubmed.ncbi.nlm.nih.gov/14644091/
IMGT-ONTOLOGY and IMGT databases, tools and Web resources for immunogenetics and immunoinformatics...
The international ImMunoGeneTics information system (IMGT; http://imgt.cines.fr), is a high quality integrated information system specialized in...
web resourcesontologydatabasestools
https://www.w3.org/standards/history/owl-guide/
OWL Web Ontology Language Guide publication history | Standards | W3C
The World Wide Web Consortium (W3C) is an international community where Member organizations, a full-time staff, and the public work together to develop Web...
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https://zenodo.org/records/6320575
An Active Inference Ontology for Decentralized Science: from Situated Sensemaking to the Epistemic...
Jul 17, 2024 - In this work, we examine science from the vantage points of blockchain technology and its connection to decentralized science (DeSci). We consider science as a...
activeinferenceontologydecentralizedscience
https://www.mitre.org/news-insights/news-release/mitre-extends-d3fend-ontology-operational-technology-cybersecurity
MITRE Extends D3FEND Ontology to Operational Technology Cybersecurity | MITRE
operational technologymitreextendsontologycybersecurity
https://mondeca.com/
Taxonomy, Ontology & Knowledge Graph Management Software | Mondeca
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https://pubmed.ncbi.nlm.nih.gov/35058462/
ICEO, a biological ontology for representing and analyzing bacterial integrative and conjugative...
Bacterial integrative and conjugative elements (ICEs) are highly modular mobile genetic elements critical to the horizontal transfer of antibiotic resistance...
biologicalontologyanalyzingbacterialintegrative
https://www.w3.org/standards/history/owl2-dr-linear/
OWL 2 Web Ontology Language Data Range Extension: Linear Equations (Second Edition) publication...
The World Wide Web Consortium (W3C) is an international community where Member organizations, a full-time staff, and the public work together to develop Web...
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https://www.w3.org/standards/history/owl-xmlsyntax/
OWL Web Ontology Language XML Presentation Syntax publication history | Standards | W3C
The World Wide Web Consortium (W3C) is an international community where Member organizations, a full-time staff, and the public work together to develop Web...
owlwebontologylanguagexml
https://ont.io/
Ontology – The Trust Layer for Web3
Ontology enables developers and users to manage digital identity, reputation, and communication in Web3 — with privacy, trust, and control at the core.
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https://gdotv.com/blog/tag/ontology/
ontology | gdotv - Graph Database IDE
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https://www.w3.org/TR/owl2-xml-serialization/
OWL 2 Web Ontology Language XML Serialization (Second Edition)
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https://www.w3.org/groups/wg/webont/
Web Ontology | Working Groups | Discover W3C groups | W3C
The World Wide Web Consortium (W3C) is an international community where Member organizations, a full-time staff, and the public work together to develop Web...
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https://www.w3.org/standards/history/vocab-org/
The Organization Ontology publication history | Standards | W3C
The World Wide Web Consortium (W3C) is an international community where Member organizations, a full-time staff, and the public work together to develop Web...
the organizationontologypublicationhistorystandards
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https://pubmed.ncbi.nlm.nih.gov/35317743/
The Xenopus phenotype ontology: bridging model organism phenotype data to human health and...
The XPO serves as an example of current best practices to help overcome many of the inherent challenges in harmonizing phenotype data between different...
human healthxenopusphenotypeontologybridging